Pseudarthrobacter psychrotolerans: GU243_06885
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Entry
GU243_06885 CDS
T06403
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psey
Pseudarthrobacter psychrotolerans
Brite
KEGG Orthology (KO) [BR:
psey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psey03400
]
GU243_06885
DNA repair and recombination proteins [BR:
psey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GU243_06885
Archaeal homologous recombinant proteins
GU243_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
MSA-2c
Motif
Other DBs
NCBI-ProteinID:
QHK19509
UniProt:
A0A6P1NIV1
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All DBs
Position
contig_1:complement(1458148..1461225)
Genome browser
AA seq
1025 aa
AA seq
DB search
MRIHRLVISAFGPFAGTEEIDFDRLSAHGLFLLNGPTGAGKTSVLDAVCFALYGSVPGAR
QEGKRLRSDHAEPSLEPAVTCEFSAQGRHFEVTRSPAWDKPSARGKNGFTTQQAKTLLRE
RISGTWTERSGRNDEAGAEITALLGMDREQFTRVVMLPQGDFAAFLRSKAADRLELLQKL
FGTQRFEALEQELSAQAQAARNDVARLNGELEVLAGRAEAEAAALAIDDSAAPAQEESAA
RIEWLQETVAHRAGELAAAAEAATDVSRHTSGRLESESARRERHRKLAAAEARKADAEAI
LPSLELHGVRLEQHRRAEVLTGQLQAVQHGQTQVRHAAGAMESATTLLRMAADEDPELGQ
LDLGALDAGNADAGLSAAGALDIAGELSRLRSLLAVVEARLPDEERLHSLVARRAALTTK
QQELAQKDIDLGVSLQGLRAEQETLTAGLEPVVELASAATLHAKEAAAAGELLDVVRRYA
AARAAQALATERHSASREIQLEKKLRWLDLREERLANAAAELAAQLAEGEACPVCGSADH
PAPAEAAASALGLSQAEEAAQQDHEAAETKLAARARELADANQLVAVLESQGGDMPEEDA
MTGFESARTVAGESQLAVKNLADLRQQLEAAEAGIAAADSARHSAASELAQVTVELSGLV
DQLASLDSALSALRGRHRSLTHRLRSLQDAAATLEKAVEAQALLTRAKARAEEARIQLEL
ALPDAGFSSAEVARAQLLSNADAAALQAEVRAGQDEQARIAELFASEDLLLALAEKAAHP
MVDEALLAQLQAAAEQAGQEARAADLAAGMAVRCVESLAAVRHDYQQLAGSGRVPRERAQ
LLTALADTAAGRGDNTYRMSLNSYVLAARLEQVALAASERLVAMSDGRYLLQHSDAKAAR
GAKSGLGLEVVDQWTGHRRDTSTLSGGESFMASLSLALGLADVVQQESGGIQIETLFVDE
GFGSLDEQSLEQVMDALEGLRDGGRVVGLVSHVGEMKQRIGTQLQVLKGRNGSTLRISDA
AEALV
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaggatccaccgccttgtcatctccgccttcgggccctttgcgggcaccgaggaaatc
gatttcgacaggttgagcgcccacgggctctttctcctcaacggacctaccggagcaggg
aagaccagcgtgctggacgctgtttgctttgcgttgtacggatccgtgccgggggcgcgc
caggagggcaagcgcctgcgcagcgatcatgccgagccgtcgcttgaaccggcggtcacc
tgcgagttttccgcccagggccgccacttcgaagtcaccaggtcgccggcctgggacaaa
cccagtgcccggggaaaaaacggcttcaccacacagcaggccaaaacgctcctccgggaa
cgcatcagcggaacgtggacggagagatccggacgcaatgatgaagccggcgctgaaatc
accgccctgctgggaatggaccgggaacagttcacccgcgtggtgatgctgccgcaaggc
gattttgccgcctttctgcggtccaaggcagccgatcgcctggaactgctgcagaagctc
tttggcacccagcggttcgaagctctggaacaggagttgtcggcgcaggcccaggccgcg
cggaacgatgttgcccggctgaacggcgagcttgaagtgctggcgggtcgggccgaagcc
gaggccgctgccttggccattgatgattctgcggctcctgcccaagaggaatcggctgcc
cggatcgaatggctgcaggaaaccgtggcccaccgcgcaggggaactggctgcggcggcg
gaggccgcaacggacgtcagtaggcacacgtcaggccggctggagagcgagtccgcgcgg
cgggaacggcaccgcaagctggcagccgctgaggcccgtaaagcagacgctgaggcaatc
ctgccctccctggaactccatggcgtccggctcgaacaacaccgccgtgccgaggtgctc
acgggccagctgcaggctgtccagcacggccagacccaggtccggcacgcggccggagcc
atggaatccgccaccacactgctgcggatggccgccgatgaagaccccgaactgggccag
ctggaccttggcgccttggatgcgggtaacgccgacgccgggctctccgccgccggggct
cttgacatcgcgggtgagctcagccgcctccggtccctgttggccgttgtggaagccagg
ttgccggatgaggaacgccttcattcactggttgccaggcgcgccgcgctcaccacgaag
cagcaggaactcgcacaaaaggacattgaccttggcgtttcgctgcagggcctccgcgcg
gagcaggaaaccctgacggcaggcctggagcccgtggtggaactggcctcagccgccacc
ctccatgccaaggaagccgctgcggctggggaacttcttgacgtcgtccggcgctacgcg
gccgcacgcgcggcgcaggcgctcgccacggagcgccactcggcgtcccgggagatccag
ctcgagaagaaactccgctggctggacctgcgcgaggaaagactcgccaacgccgccgcc
gaactcgccgcccagctggccgagggagaggcctgccccgtttgcggcagtgcggaccac
cctgctcccgcggaggctgcggcgtccgcgctgggcctcagccaggccgaggaagctgcc
cagcaggaccatgaggccgccgagacaaagctggcagcgcgggcccgtgagttggccgac
gcgaaccagttggtggctgtccttgaaagccagggcggggacatgcctgaagaggatgcg
atgactggcttcgagtctgcccgcacagtcgccggagagtcgcagctggcggtgaagaat
ctcgcggacctccgtcagcagcttgaggctgcagaagccggaattgccgcagcggattcc
gccaggcacagcgcagcgtccgaactcgcgcaggtgaccgttgaattgtcgggactggtg
gaccagctggcgtcccttgacagcgcactctctgcgctgcgtggccgtcaccgcagcctc
acgcacaggctgcggtcgctgcaggacgccgccgccacgttggagaaggccgtggaggcc
caagccttgctcaccagagccaaggccagggccgaggaagcacggatccagcttgaactg
gcgttgccggacgctggcttcagctcggcggaggtggctcgcgcacagctgctttcgaat
gctgatgctgctgccctgcaggccgaggtccgggccggccaggacgaacaggcgcggatt
gccgagctgttcgcatccgaggatctgctgctggcactggctgaaaaggcagcccatccc
atggtggacgaagccctcctcgcgcaactgcaggccgccgcggagcaggccgggcaggaa
gcacgggccgccgatcttgccgccggcatggccgtgcgctgtgtggaatcgctggccgct
gtccgccacgactaccaacagctggccggttccgggcgggttcccagggaacgcgcccag
ctgctgacagccctggctgataccgccgccggccgtggagacaacacctaccgcatgagc
ctgaacagctacgtcctcgcggcacggctcgaacaggtggcgttggctgcttccgaacgg
ctggtcgccatgagcgatggccgctacctgctccagcactcggacgccaaggccgcgcgc
ggcgcaaaatccgggttggggctggaagttgtggaccagtggaccggacaccgccgggat
acttccaccctttccggcggtgagtcctttatggcgtccctgtccctcgccctcgggttg
gcagacgttgtgcagcaggaatccggtggcatccagatcgagacgctttttgtggacgag
ggcttcggcagcctggacgaacaatccctggaacaggtcatggatgccctcgaaggcctt
cgcgacggcgggcgcgttgtgggtctcgtcagccatgtgggggagatgaaacagcgcatc
ggaacccaactccaggtcctcaagggccggaacggttccacgctccgcatttccgacgcc
gccgaggccctggtgtga
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