Pseudarthrobacter psychrotolerans: GU243_07885
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Entry
GU243_07885 CDS
T06403
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psey
Pseudarthrobacter psychrotolerans
Pathway
psey03420
Nucleotide excision repair
psey03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GU243_07885
03430 Mismatch repair
GU243_07885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psey03400
]
GU243_07885
Enzymes [BR:
psey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GU243_07885
DNA repair and recombination proteins [BR:
psey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GU243_07885
MMR (mismatch excision repair)
Other MMR factors
GU243_07885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DivIVA
Motif
Other DBs
NCBI-ProteinID:
QHK19660
UniProt:
A0A6P1NMF4
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All DBs
Position
contig_1:complement(1684222..1687770)
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AA seq
1182 aa
AA seq
DB search
MSHPQVPEPLFSPEELSRLLGEKNTPTPEQSAIISSPLAPRLVIAGAGSGKTATMADRVV
WLVANGWVRPEEVLGVTFTRKAAGELATRIRAKLAALQRVAAQDTRHDVFPAGLLSSDAL
EPKVSTYHSFASGIVSDYGLRLGVERDVVLLGGAQAWQLASEVVEAFDGDYSHFKAAKST
LVKAVIQLAGECAEHLQEPADVEAWLLARLAEFEERPYLAGAKKNAPQAASELAAMLRTR
ASVADMVGRYAAAKKSRGALDFGDLVALAARVSREIPIAADMERQRYKVVLLDEFQDTSY
AQLVLFSRLFGEGHAVTAVGDPNQSIYGFRGASAGQLFHFVREFPVRVDGDDGPGRFVPA
PTSYLTTAWRNGRAILSAANIMSEALGRAEAQKAVAGSAPAVTAAAGATPAGTMPAGTAA
AAANVPPLQPSPFAVDGRVVLGRFGTDLDEAAALAEDIMKYRVTDFEREADGTPVPPALA
VLCRRRAQMETIRREFEARGIAYEIVGLGGLLDTPEIVDLVATLRVLADPGRSDSLMRLL
AGARWRIGPADLMAFRDWSSQLARRRGRPANAATPEDGPADASDEAVIESDLTDGASLVE
ALDWLPREDWTSSHGRSLTEPARDRLGRLSTELRQLRGYLGDDLTTLLGEVERAMLLDIE
VAARPGTSIHQARRNLDAFQDAAAGFLRTSHRVDILAFLAWLEAAAAEENGLEAPPSDIN
REAVQLLTVHASKGLEWDVVFVPGLNAGAFPSSKDSRWSSGAAALPWPLRGDRSDLPQWD
TDQPDQKGWLDAEKDFKSAVQVHGEGEERRLAYVAYTRAKHVLWVSSAAWVGSRAGRAEM
SPFLAELEQLAGPGSAPAEGMETCAMVHPASVDEASLPEKSPLTTETEVAGWPYDPLEGP
VDARTGERLRVVPGRRLAMESAAARVRAALEPFVPEDSVPVLEPASDNESGPRLRGNAAG
WAREAALLLERRSRRASGQDVHLPGHISASTLVDLGEDPAGVVGRLRRPVPREPGMSARK
GTAFHAWVEEYFGAAGMLDLGEAPGSDDHIDAAYDLDTMVATFEASEWADRSPAFVEVPV
ETRVGDVVVRGRIDAVFQDADGRWDLVDWKTGRRPSAAQLRAKSVQLAAYRLAWARLKGV
AVEDVRAAFFYVADNQVVRPHDLGSAEELEQIVAAALDVGVP
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccccaggttccagagcccctgttcagccccgaggagctgtccaggctgctg
ggcgaaaagaacacccctacccccgaacagtccgccatcatttcctcacccctggctccc
cggctggtgatcgcgggagcgggctccggcaagaccgccaccatggccgaccgcgtcgtc
tggctcgtcgccaacggctgggtcaggcctgaggaagtcctcggcgtaaccttcaccagg
aaggcggccggcgagctggccacccggatccgggccaaactggccgcactgcagcgggtc
gctgcccaggacacgcggcatgacgtgttccctgccgggctgctcagcagcgacgccctt
gagcccaaggtgtccacctatcactcattcgccagcgggatcgtttctgactacgggctg
cggcttggcgtggaacgcgacgttgtgctgctcggcggggcccaggcctggcagctcgcc
agcgaagtggtggaagcgttcgacggcgactacagccacttcaaggcagccaagtccacg
ctggtcaaggcagtcatccagctcgcgggggagtgcgcagagcacctgcaggaaccagcc
gacgtcgaggcctggcttctggcacgccttgccgagttcgaagaacgtccctacctggcc
ggagcgaagaagaacgccccgcaggcagccagtgaactggctgcgatgctgcgaaccagg
gccagcgtggctgacatggtgggccgctacgccgccgccaagaagtcacggggggcattg
gacttcggcgacctggtggcacttgcggcccgtgtctcccgggagatccccattgcagcg
gacatggaacgccagcgctacaaagtggtgctcctggacgagttccaggacacgtcgtat
gcccagctggtcctgttttcgcggcttttcggcgagggccacgcggtcaccgccgtgggg
gaccccaaccagtcgatttacggcttccggggtgcttcggcaggtcagctcttccacttt
gtccgtgaattcccggtccgcgtggacggggacgacgggccgggacgcttcgtaccggcc
ccgacgtcgtacctcactactgcgtggcgcaacggccgggccatcctgtccgccgccaac
atcatgtcagaggccctagggcgcgccgaggcccagaaggccgttgccggcagcgcccct
gcggtcaccgctgcggcaggcgcgaccccagcgggcaccatgccggcgggcacggctgcc
gcggcagcgaatgtgccgcccctgcagcccagccccttcgccgtggacggacgggtggtt
cttggccgcttcggcacagacctcgacgaagccgcagcccttgcggaggacatcatgaag
taccgggtcacggacttcgaacgggaggccgacggcaccccggtaccgccggcactggcc
gtcctgtgccggcgccgcgcccagatggaaaccatccggcgggagttcgaggcgcggggg
atcgcctacgaaatcgtggggctcggcgggctgctcgacacgcccgaaatcgttgacctg
gtggccacgctccgggtacttgctgatccaggacgctcggactccctgatgcgcctcctg
gccggcgcacgctggcgcatcgggcccgctgacctgatggctttccgcgactggtccagc
cagctcgcacgccgccgaggacgcccggccaacgctgccacgccggaggacgggcccgca
gacgcgtccgacgaggccgtcatcgaaagcgacctgactgacggtgccagcctggttgaa
gcgctggactggctgccacgcgaagactggacctcttcccatggccgttcgttgaccgag
ccggcccgcgaccgcctcggcaggctctcgacggaactcaggcagctgcggggctacctc
ggggacgacctcaccaccttgctcggcgaggtggaacgcgccatgttgctcgacatcgaa
gtggctgcgcgcccgggaaccagcatccaccaggcccgccgaaacctggatgcattccag
gacgcggcggctggcttcctgcggacctcgcaccgggtggacatcctcgcgttcctagcc
tggcttgaagctgccgcggccgaagaaaacggcctcgaagctccgccgtcggatatcaac
cgcgaggctgtgcagctgctgaccgtccatgcgtccaagggcctggaatgggacgtcgtt
tttgttccgggtcttaacgccggggccttccccagcagcaaggactcccgctggagcagc
ggcgcggcggccctgccgtggcctctccggggggaccgttcagatcttccccaatgggat
accgaccagccggaccagaagggctggctggacgccgagaaggacttcaaatcagccgtc
caggtccatggtgagggcgaagaacgccgcctggcatacgtggcctacaccagggcaaag
catgtcctctgggtctccagcgcagcatgggtgggctccagggcaggccgcgccgagatg
tccccgttcctcgctgaactggaacagcttgccggccccggctccgccccggcggagggc
atggagacgtgtgccatggtgcacccggcgtcagtggacgaagcctctttgcctgaaaag
agccccttgacgaccgaaactgaggtggccgggtggccttatgaccccctcgaaggcccg
gtggacgcgcggaccggagagcgcctgcgggttgttcccggcaggcggctggccatggaa
agcgccgcggcacgcgtccgggcagccttggagcccttcgttcctgaggactcggtgccc
gtccttgagcctgcatccgacaatgagtccgggccaaggctccggggcaatgcggcgggc
tgggccagggaagctgccttgctgctggaacggcgttcccggcgcgcctccgggcaggac
gttcacctgcccggccacatctctgcgtccacgctggtggatcttggcgaggacccggca
ggagtggtgggccggctccgaaggcctgttccgcgtgagcccggcatgtcggcgcggaag
ggaacggcattccacgcctgggttgaagagtacttcggcgccgccggcatgctggatctc
ggcgaggcccccggctccgacgaccatattgacgccgcctacgacctcgacaccatggtg
gccaccttcgaagcctcggagtgggccgacaggtcaccggcatttgtcgaggtcccggtg
gaaacgcgggtgggcgatgttgtggtccgcggacgcatcgacgctgtcttccaggacgcg
gacggccggtgggacctggtggactggaaaaccggccgccggccctccgccgcgcagctg
cgggccaaatcggtgcagctcgccgcgtaccgcctggcttgggcccggctcaagggcgtt
gcagtcgaggacgttagggccgccttcttttacgttgcggacaaccaggtggtgcggccg
cacgatctgggctccgctgaggagctcgaacagatcgtggccgcggccctcgacgtcggc
gttccgtaa
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