Pseudarthrobacter psychrotolerans: GU243_09645
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Entry
GU243_09645 CDS
T06403
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psey
Pseudarthrobacter psychrotolerans
Pathway
psey03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psey00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GU243_09645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psey03021
]
GU243_09645
03400 DNA repair and recombination proteins [BR:
psey03400
]
GU243_09645
Enzymes [BR:
psey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GU243_09645
Transcription machinery [BR:
psey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GU243_09645
DNA repair and recombination proteins [BR:
psey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GU243_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QHK19954
UniProt:
A0A6P1NN51
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All DBs
Position
contig_1:complement(2045552..2049451)
Genome browser
AA seq
1299 aa
AA seq
DB search
MSSESSFGLMQIGLATADDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDADSRHEELPNLQVEHDIEKKQLIDNRDSDIATIARDLENE
IARLEGEGAKAADKKKARDSADRQMANVRKRADAEIDRLEQVWERFKTLKVADLEGDEGL
YRELRDRYGIYFEGSMGAEAIKKRLENFDMQAESDLLRDIIANGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRVGSAGEGR
VFSSVAEAIMAYDLRELHLNSQVRIRLEGFVPYAGWEAPEGYEPGQTVLVQTSLGQVIFN
QTLPADYPWVENVADKGELSTIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPKDKPKILAGYEIMAAKIQGQYDKGLIDDDERRQELIEIWNKATNEIAQVMRDNLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLVTPIAVPDANGELVLDE
NVENSAYARTLAVDVLDSKGNVLAAGGTDCGDVVIAELFAAGITEVKVRSVLTCESSVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSATGGEDITQGLP
RIQELFEARTPKGVAPIAEAAGRIAIEESERQMRLVITPDDGSEEIAYPVLRRSRLLIED
GEHVTVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGESDLLPGELAERSRFEEANRRVVSEGKTPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKAN
LFTGPSAFSDFSYDSLGGDGAPEFHAIPLDDYDLGNDFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggatgacatc
cgtggctggtcttacggcgaggttaagaagccggaaaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggcccttcccgcgactgggaatgc
tactgcggtaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcggtgtggcgtc
gaagtcacccgtgcgaaggtccgccgtgagcgcatgggccacattgagctggccgccccg
gtcacgcacatctggtacttcaagggtgttccgtcccgtttgggctacctccttgacctg
gcaccgaaggacctcgaaaaggtcatctacttcgctgcctacatgatcaccagcgtcgac
gccgacagccgccacgaggaactgcccaacctgcaggttgagcacgacatcgagaagaag
cagctgatcgacaaccgcgactccgacatcgccacgattgcccgtgacctcgaaaacgag
atcgcgcgcctcgaaggtgaaggtgccaaggctgccgataagaagaaggcccgcgactcc
gcggaccgtcagatggccaacgtgcgtaagcgcgccgacgccgagatcgatcgcctcgag
caggtttgggagcgcttcaaaacccttaaggtcgctgaccttgaaggcgacgaaggcctt
taccgcgagctgcgcgaccgctacggcatctacttcgaaggctccatgggtgccgaagcc
atcaagaagcgtcttgagaacttcgacatgcaggccgagtctgacctgctgcgcgacatc
attgccaacggcaagggccagcgcaagacccgtgccctgaagcgcctgaaggtggtcaac
gcgttcctgaccaccaacaacagcccgctcggcatggtgctggacgccgtcccggtgatc
ccgccggaactgcgcccgatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctctaccgccgtgtgatcaaccgcaacaaccgtctcaagcgcctgcttgacctc
ggagccccggagatcattgtcaacaacgagaagcgcatgcttcaggaagctgttgacagc
ctcttcgacaacggccgtcgcggccgtccggtcaccggtcctggcaaccgtccgctgaag
tccctgagcgacatgctcaagggcaagcagggccgtttccgccagaacctcctcggcaag
cgcgttgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgtggcctgcccaagcagatggcactggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagtcggccaagcgtatggtcgagcgttaccgt
ccgcaggtctgggacgtgctggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacctaccctgcaccgccttggcatccaggcgttcgaaccgcagcttgttgaaggtaag
gcaatccagctccacccgctggtttgtggcgccttcaacgctgacttcgacggcgaccag
atggcagtccacctgccgctgagccccgaagcccaggctgaggcacgcatcctgatgctg
tcctcgaacaacatcctgaagccgtccgacggccgcccggtcaccctgccttcgcaggat
atgatcatcggtctttaccacctgaccaccaagcgtgtcggttcagctggcgaaggacgt
gtcttctcttcggttgccgaagccatcatggcttacgacctccgcgagctgcacttgaac
tcgcaggtcaggatccgtctcgaaggcttcgttccgtacgcgggctgggaagctccggaa
ggctacgagccgggtcagaccgtgctcgtccagacctccctgggccaggtcatcttcaac
cagacgctgccggcggattacccgtgggttgagaacgttgctgacaagggcgaactgtcc
acgatcgtcaacgatctcgccgagcgttacccgaaggtggtcacggcggcaacgctggac
aacctgaaggatgccggtttctactgggccacccgctcgggcgttaccgtcgccatctcg
gacatcgaggtacccaaggacaagccgaagatcctggccggttacgaaatcatggctgcc
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgtcgccaggaactg
atcgagatctggaataaggcaacgaacgagatcgcccaggtgatgcgtgacaacctgtcg
ccgatgaacaccatcaaccgtatggtgtcctccggtgcacgtggtaactggatgcaggtc
cgtcagatcgcgggtatccgcggcctggtggccaaccctaagggtgaaatcatcccgcgt
cccatcaagtcctcctaccgcgagggcctgtcggtgctggaatacttcatcgccacgcac
ggtgcccgtaagggtctggctgacaccgcgctgcgtaccgccaactcgggttacctgacc
cgtcgtctggtggacgtgtcgcaggacgtcatcgtccgcgaagaggactgcggcaccgag
cgcggcctggtcacgccaatcgccgtgccggacgccaacggcgagctggtcctggacgag
aacgtcgagaacagcgcctacgcccgtacgctcgctgttgacgttctggactctaagggc
aacgtccttgcagccggcggcaccgactgcggcgacgtcgttatcgctgagctgttcgca
gccggcatcaccgaggtaaaggtccgctctgtactcacctgtgagtccagcgtcggcacc
tgcgccctgtgctacggccgttccctggccaccggcaagaccgtggacatcggcgaggct
gtcggcatcatcgccgcacagtccatcggtgagcccggtacccagctgaccatgcgtacg
ttccacaccggtggtgctgtttcagccaccggtggagaagacatcacccagggtctgccg
cgtatccaggagctcttcgaagcccgtactccgaagggtgtcgcaccgattgctgaagca
gccggccgcatcgccatcgaagagtccgagcgtcagatgcgcctggtcatcaccccggat
gacggatctgaagagatcgcctacccggtactgcgccgttcacgcctcctcatcgaggat
ggcgagcacgtcacagtaggccagaagctcatcaacggtccggtggatcccaagcaggtt
ctgcgcatcatgggtccccgtgccgcgcagaagttcctggtggacgaagtccagggcgtg
taccgcagccagggcatcggtatccacgacaagcacgtcgaggttatcgtccgccagatg
ctgcgccgcgtcacggtcatcgagtccggcgaatcggatctgctccccggcgagctcgcc
gagcgcagccgcttcgaggaggccaaccgccgcgttgtgtccgagggcaagactccggct
tccggacgtcctgagctcatgggcatcaccaaggcgtccctggccaccgagtcctggctg
tccgcagcttccttccaggagaccacccgcgtcctgacgcaggcggccatggaaggcaag
agcgacccgctgctcggcctcaaggagaacgtcatcatcggtaagctgatcccggccggc
acgggtctcccgcgctacaccgaggtcaccgtggagcccactgaggaagcgaaggccaac
ctgttcaccggccccagcgcattcagtgacttctcgtacgactccctgggcggcgacgga
gctcctgagttccacgccatcccgctggatgactacgatctcggcaacgatttccgctag
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