Aquirufa nivalisilvae: HME7025_00473
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Entry
HME7025_00473 CDS
T05454
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
psez
Aquirufa nivalisilvae
Pathway
psez02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HME7025_00473 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psez02000
]
HME7025_00473 (msbA)
Enzymes [BR:
psez01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HME7025_00473 (msbA)
Transporters [BR:
psez02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HME7025_00473 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
DEAD
ABC_membrane_2
AAA_16
AAA
AAA_22
RsgA_GTPase
AAA_25
nSTAND3
AAA_18
nSTAND1
CNOT1_1st
AAA_21
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AWL08345
UniProt:
A0A2S2DSJ6
LinkDB
All DBs
Position
525893..527722
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AA seq
609 aa
AA seq
DB search
MKTYLRLLSYAVSIRKYIFPYFGFSLMASLFGILNFTLLIPLLNVLFNQAATSNIELYRN
LPEFSFSPNYFSFAFNHYFYGALEQYGRIGALQYACGAIMISVILSNIFRYFSQRVLKTV
EADTIASLRQAVFEQAIRLDLSYFSERKKGNLMSRLTTDVQEVENSIGRAFTATFKEIFS
LVLFFVFLASMSGKLTLFSLMILPLSGGVIATITRRLRRAAGEVQQHLSGLISLLDETFG
AMRVVKAFRAEPMMDQRFQQENGKYRHSLLKMVFRQELTSPVSESLGVLVVTGILLYGGT
LVISGDGELSASTFIAFIATFSQVMRPAKAIADAFSGIQRGVASADRIIEILDTQPSIVA
EEPIIPKKELVHRIVFDQVNFAYQKDKLVLDQVSFEIPKGKTIALVGPSGGGKSTLADLL
PRFYDPNSGQILIDDVPIKQVPLEDLRSLMGIVTQESVLFNDTIFNNIAFGTEASQEEVE
EAAKIANAHDFIMANPEGYQAYIGDRGSKLSGGQRQRISIARAVLKNPPILILDEATSAL
DNESEKLVQAALTNLMKNRTVLVIAHRLSTIQHADQILVVQKGKIMERGTHEELMRDSKG
LYAKLSHSK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacctatctccgactacttagctacgccgtttccattcggaagtatatatttcct
tatttcggattttcattaatggccagcttatttggaatcttaaatttcactttgttgatt
ccgctattgaatgtgcttttcaatcaggctgcaacatctaacattgaattataccgaaat
cttcctgaattcagcttttctcccaattatttctcttttgcttttaatcattatttctat
ggtgcattagagcaatacggtagaattggcgctttacagtatgcctgtggagctattatg
atttccgtgattttgtccaatatctttcgttatttttcacagcgagtattaaaaacggtg
gaggctgacaccattgcttctttgaggcaagccgtattcgaacaagctattcgtttggat
ttgagctatttcagtgagcgcaaaaaggggaatttgatgtcgcgcttgaccacggacgta
caggaggtggaaaatagtatcggccgggcctttactgctactttcaaagagatcttttct
ttagtcttgttttttgtctttttagctagtatgtctggcaaattgactttattctctctt
atgatccttccactttcaggaggagttattgctaccattactcgaagattacgtcgtgca
gcgggagaagttcagcagcatttaagtggtttgattagcttattggatgagacttttgga
gccatgcgtgtagtgaaggcgtttcgagcagagccaatgatggatcaacgatttcagcaa
gaaaatgggaaataccgacattccttgttgaagatggtattccgacaagaattgacttca
cctgtctcggaaagtttgggagtgttggtggttacaggaatattgttgtatggaggaaca
ttagtgatttctggagatggagaattaagtgcgtctaccttcattgcttttattgctact
ttttcacaggtaatgcgacctgccaaggcaatagcagatgcattcagtggtattcaacgc
ggtgtggctagcgctgaccggattatagaaatcttagatacccagcctagtattgtagca
gaggagccaattattccaaagaaagaattggttcatcgcatcgtttttgatcaggtgaat
tttgcttatcaaaaggataaattggtattagatcaagtcagttttgagattcccaaaggg
aagaccatcgcattggttggtccatcaggtggtggtaaatccactttggcggatttgttg
ccccgtttttatgatcctaattcaggtcaaattttaattgatgatgtgcccattaaacaa
gtacctctagaagatttgcgctccttgatgggtatcgtaactcaagaatccgttttgttt
aacgacaccatattcaacaacattgcctttggtacagaagctagtcaagaagaagtagaa
gaagctgctaagattgctaatgcacatgattttattatggccaatccggagggctatcaa
gcttatattggggaccgaggttcaaaattatcgggtgggcaacgtcagcgaatatccatt
gcgagagctgtattgaaaaatccacctattttgattttagatgaagcaaccagtgcgcta
gacaatgaatcggagaaattagttcaggcagctttaacgaatctgatgaagaatagaacg
gtgttggtaatcgctcatcgtttaagtaccatacagcatgcggaccagatattggtcgta
caaaaaggaaagattatggaaaggggaacgcatgaggaattaatgcgtgattcgaaggga
ctttatgctaaattaagtcattccaaataa
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