Aquirufa nivalisilvae: HME7025_01153
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Entry
HME7025_01153 CDS
T05454
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psez
Aquirufa nivalisilvae
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psez03016
]
HME7025_01153 (truA)
Enzymes [BR:
psez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HME7025_01153 (truA)
Transfer RNA biogenesis [BR:
psez03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HME7025_01153 (truA)
Prokaryotic type
HME7025_01153 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
AWL09016
UniProt:
A0A2S2DUI7
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All DBs
Position
1313698..1314465
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AA seq
255 aa
AA seq
DB search
MSRYLLQFSYDGGFFHGFQIQQNAVSVQSELEKALSTIAGIPVDLVGSSRTDTGVHAREQ
FAHFDIIEEANQPKVDWVYRLNRILPASLAIQAIYQVPDEFHARFDATGRTYEYHISLSK
DPFSRDHAYWFEAPMNMEAMNQAAQLLLNHRDFQSFSKVKTDVTTFDCQISRAEWQKVGN
QLIFTIEGNRFLRGMVRAVVGTLIEIGLGKWDEADLIRILDAKDRKQAGRAVPAHGLHLI
HVAYPEITFVSKCSS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttatctactacagttttcgtacgatggcggcttttttcatggatttcaaatc
cagcagaatgctgtttcagttcagtcagaattagagaaggcattaagtaccattgctggt
attccagttgatttagtgggaagtagtaggactgatacgggcgtccatgcccgagaacaa
tttgctcattttgatattattgaggaggcaaatcagccaaaggtggattgggtatatcga
ttgaatcgaatattacctgctagtttagccattcaagctatttatcaagtacctgatgag
tttcatgcccgttttgatgctacaggcaggacttatgaataccatattagtctatcaaaa
gatccattttcaagagatcatgcttattggtttgaagctccaatgaacatggaggccatg
aatcaagcagcccagctattattgaatcaccgagattttcagagtttttctaaagtaaag
acagatgtgacgacattcgattgtcaaatcagtcgagcagaatggcaaaaagtaggaaat
cagttgatttttaccattgaaggaaatcgatttttgagagggatggttcgtgcagtagtt
gggactttgattgaaattggattaggcaaatgggatgaagcggatttaatcagaatttta
gacgctaaagatcgaaagcaagcaggaagagctgtacccgcgcatggtttgcatttaatc
catgttgcttacccagaaattactttcgtttccaaatgttcatcataa
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