Aquirufa nivalisilvae: HME7025_01375
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Entry
HME7025_01375 CDS
T05454
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
psez
Aquirufa nivalisilvae
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psez03009
]
HME7025_01375 (rluD)
Enzymes [BR:
psez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HME7025_01375 (rluD)
Ribosome biogenesis [BR:
psez03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HME7025_01375 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AWL09235
UniProt:
A0A2S2DV38
LinkDB
All DBs
Position
1569353..1570396
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AA seq
347 aa
AA seq
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MSIDNEIDPIESEDDLFEHFNFTVDKGQQLLRIDKYLLLKISNATRSKIQSGIEAGSVKV
NGLNIKSNYKVKPFDEIVVSFSHPPRDKDIVAENIPLDIIYEDEELILVNKPSGMVVHPA
HGNWEGTLVNALLYHCQHLPGKGDIRPGLVHRIDKDTSGILVVAKSEFSLNHLARQFFDH
TIDRTYYAICWGVPKESKATLRGKIDRSPRDRKVMMMFPEEAEHGKLAITHYEVMESFGF
CSLVQFNLETGRTHQIRAHAASIGHPLLSDAAYGGDKIRYMSSIANFKTFAANLMKLCPR
QALHAFSLGFDHPKANERIYFEQDFPEDMREVLYRLREVTNHGANRN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtccatagataatgaaatagatcccattgagagtgaagatgatttgtttgaacatttc
aatttcacggtggacaaaggtcaacaattacttagaatagataaatacctacttctaaaa
atttccaatgctactcgttctaaaattcaatctggaattgaggctggttcagtcaaagta
aatggccttaatattaagtcgaattataaggttaagcctttcgacgagattgttgtatct
ttttcccatccacctagagataaagatatagtagcagaaaatatccctttggatatcatc
tacgaagatgaagagcttattttagtaaataaaccttctggtatggtggtgcatcctgct
catggaaattgggaaggaactttggttaatgcattactgtatcattgtcaacatttgccg
ggcaaaggagatattcgtccgggtttagtgcatcggattgataaagatacttcgggtatt
ttagttgtcgctaaatcagagttttctttaaaccacttagctagacagttttttgatcat
acgattgatcgaacttattatgcaatttgttggggtgtacccaaagaaagtaaagccact
cttcgcggaaaaatagatcgtagtcctcgtgataggaaagtaatgatgatgtttcctgaa
gaagcggaacatggaaagttggccattacgcactatgaagtaatggagtcttttggtttt
tgttctttagttcaatttaatttagaaactggtcgtacacaccaaattagagcccatgct
gcttccattgggcatccattattatctgatgctgcttatggtggtgataaaattcgctat
atgagttctattgcaaattttaaaacctttgcggctaatttaatgaagctttgtcctagg
caagctttacatgctttttctttgggtttcgatcatcctaaagccaacgaaagaatatat
tttgagcaagattttccagaagatatgcgagaagttctatatcgattaagagaagttacg
aatcatggagcaaatagaaattag
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