Aquirufa nivalisilvae: HME7025_01380
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Entry
HME7025_01380 CDS
T05454
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psez
Aquirufa nivalisilvae
Pathway
psez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HME7025_01380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psez03019
]
HME7025_01380
03110 Chaperones and folding catalysts [BR:
psez03110
]
HME7025_01380
03029 Mitochondrial biogenesis [BR:
psez03029
]
HME7025_01380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psez04147
]
HME7025_01380
Enzymes [BR:
psez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HME7025_01380
Messenger RNA biogenesis [BR:
psez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HME7025_01380
Chaperones and folding catalysts [BR:
psez03110
]
Heat shock proteins
HSP60 / Chaperonin
HME7025_01380
Mitochondrial biogenesis [BR:
psez03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HME7025_01380
Exosome [BR:
psez04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HME7025_01380
Exosomal proteins of other body fluids (saliva and urine)
HME7025_01380
Exosomal proteins of breast cancer cells
HME7025_01380
Exosomal proteins of colorectal cancer cells
HME7025_01380
Exosomal proteins of bladder cancer cells
HME7025_01380
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
AWL09240
UniProt:
A0A2S2DW21
LinkDB
All DBs
Position
complement(1573963..1575594)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKELYFDTEAREKMKRGVDTLANAVKVTLGPKGRNVIIDKKFGSPSITKDGVSVAKEIE
LEDAVENMGAQLVKEVASKTADQAGDGTTTATVLAQSIYTIGSKNVAAGANPMDLKRGIE
KAVEAIVGNLRTQSRPITTSTEIAQVATISANNDVEIGQMISSAMEKVGREGVITVEEAR
GTETEVKTVEGMQFDRGYLSAYFVTNTDKMEVELEKPFILISEKKVSSMKELLPVLEAVA
QTGRPLLIISEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGTVI
AEERGFKLENATLEYLGQAEKVIIDKDNTTVVNGNGSKDDIENRVNQIKAQIENTTSDYD
REKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALIR
AISALDTLTGENEDQNTGINIIRQAVESPLRTIVSNAGGEGSVVINAVKAGKDDFGYNAR
EDKYENMIAAGIIDPTKVTRLALENAASIAGLLLTTECVIADKPAAEPAHGHGPGGGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaactatattttgacaccgaggcgagagaaaaaatgaaaagaggggttgat
acccttgcgaacgccgtaaaagtaacattaggacctaaaggacgtaatgtaattattgat
aaaaaattcggatcaccttctattacaaaagatggtgtgtctgttgcaaaagaaattgaa
ttagaagacgccgtggaaaacatgggtgcacaattagtaaaggaagtagcttctaaaaca
gctgatcaggctggtgatggtactactactgctactgtattagctcaatcaatctacaca
attggttctaaaaacgtggctgctggtgctaatccaatggatttaaagcgtggtattgag
aaggctgtagaagctatcgttggtaacttaagaactcaatctcgtcctatcactacttct
actgaaattgctcaagtagcaactatttcagcaaataatgatgttgaaatcggtcaaatg
atttcttcagccatggaaaaagtaggtcgcgaaggtgttatcacggttgaagaagctcgt
ggtacagaaacagaagttaaaacggtagaaggtatgcaatttgatcgtggatatttatct
gcgtattttgttactaatactgacaaaatggaagtggaattagaaaagccattcattttg
atttctgagaagaaagtgtcttctatgaaagaattacttccagtattggaagcagtagct
caaactggccgtccattgttgattatctcagaagatgttgatggtgaggctttagctacc
ttagttgttaataaaatccgcggtgctctgaaagtagctgctgttaaagctcctggtttc
ggtgatcgtagaaaagcaatgttagaagatatcgctatcttaacaggtggtacagttatc
gcagaggaaagaggattcaaattggaaaatgctactttagaatatctaggacaagcagag
aaagtaatcattgacaaagacaacacaacagttgttaatggaaatggttctaaagatgat
atcgagaatcgtgtaaaccaaatcaaagcgcaaattgaaaacacgacttcagattatgat
cgtgagaaattacaagagcgcttagcaaaactttcaggtggtgtagctattctttacatt
ggtgctgctactgaagtggaaatgaaagaaaagaaagaccgtgtagatgatgctttgcac
gctactagagctgctgtagaagaaggtatcgttgcaggtggtggagttgcgttaattcgt
gctatcagtgctttagatacgttgacaggtgaaaacgaagaccaaaatacaggtatcaat
atcattcgtcaagcagtagaatctccattacgtacaatcgtttctaacgcaggtggtgaa
ggatctgtagttatcaatgctgttaaagcaggaaaagatgacttcggttacaatgctcgt
gaagacaaatacgaaaatatgattgcagcaggtattattgacccaactaaagtaactcgt
ttagctttagaaaatgcggcatctattgcaggattgttattaactacagaatgtgtcatt
gctgataaaccagcagctgaacctgcacatggtcacggacctggtggcggcggaatgggc
ggcatgatgtaa
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