Aquirufa nivalisilvae: HME7025_01503
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Entry
HME7025_01503 CDS
T05454
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psez
Aquirufa nivalisilvae
Pathway
psez03030
DNA replication
psez03430
Mismatch repair
psez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HME7025_01503
03430 Mismatch repair
HME7025_01503
03440 Homologous recombination
HME7025_01503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psez03032
]
HME7025_01503
03400 DNA repair and recombination proteins [BR:
psez03400
]
HME7025_01503
Enzymes [BR:
psez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HME7025_01503
DNA replication proteins [BR:
psez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HME7025_01503
DNA repair and recombination proteins [BR:
psez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HME7025_01503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
AWL09359
UniProt:
A0A2S2DVL6
LinkDB
All DBs
Position
complement(1710219..1713782)
Genome browser
AA seq
1187 aa
AA seq
DB search
MQFSHLHNHSQFSLLDGASKISSMFKKAKTDNMPAVAITDHGNMFGVFQFVAEAGKQGVK
PIVGCEFYLVTDRHKQSFTKEQKDKRYHQLFLAKNPEGYQNLVKLCSLGFMEGMYSKYPR
IDKELVLKYHKGLIATTCCLGASVPQAILRSGEAEAEKEFKWWLDLFGEDYYIEVQNHHI
PEQQTVNEVLLRFAKKYNVKVIASNDSHYLDQKDANAHDILLCINTGEKQSTPTYKDIEG
DFDMKGKRFAFYNDQFYFKTTEEMTQLWSHIPEAIDNTNEIVGKVETLELKKDVLLPNFQ
IPSTFLSQDDFLEHLTMEGAKKRYLDINQEIEERLRFELHTIRTMGFAGYFLIVADFINA
GKDLGVYVGPGRGSAAGSVVAYCLGITNIDPIKYNLLFERFLNPDRKSLPDIDTDFDDEG
RQKVIDYVVEKYGRNQVAHIATYGTMAAKMSIKDVARVLDLPLSESNALAKLVPDKPKIS
LERVINAPLTGDGSLADKENLSSEELEQVKQLRQIKADGGLASRVIENALVLEGSVRGTG
IHAAGIIIAPNDLTDILPVATSKDVTLLITQFDGSVIENAGVIKMDFLGLKTLSILKEAI
RLIKQNHGIIIDLDSLPLDDVKTFELYQRAETNGTFQFESPGMQKHLKDLKPDQFSDLIA
MNALFRPGPMVYIPNYIARKHGREKIEYDLPEMEEYLSDTYGITVYQEQVMLLSQKLANF
TKGDADVLRKAMGKKDKATIDKMKGKFMEGGQANQHPADRLEKIWTDWEAFAQYAFNKSH
STCYGLVAYQTGYLKANYPSEFMAAVLSNSLGNIEKITFFMDECKRMGIPLLVPDVNESE
RYFAVNKKGHIRFGLGAIKGVGEAAVDAIVEERAKNGEYTDIFDFVSRINVRQVNKKSLE
SLAFAGAFDCFSEIPRSHYFYVDQENTTFIEKIVRYASRMAELKASATQSLFGELGAGTG
NDIAKPRIPTAEAWSVMEQLKNEKEVVGVYISGHPLDEYRIEINNFCNSSVSQLELKGGN
VQSFAGIVTKMNVRTSGNGNQFMIFSLEDFTGTTEFALFAKDYIEFERFIGLDRLLFIQG
VYKNKNSYSDQKAFKIQSIELLSEILSSRTKEMKLSLNLHSLNKTSLDYLLETLERHKGN
KKLVIEVYDEVERLQLDFMSRKMQLNIEKSLMDELAEIENITVKLIS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttcgcatttgcacaatcactctcagttttcccttttggatggtgcgtccaag
atatcttctatgtttaaaaaagccaagactgacaatatgccagcggtggctattacagac
catggaaatatgtttggagtatttcaatttgttgccgaagctggcaagcagggagtaaaa
ccgattgtggggtgtgagttttatttagtgacagatcgtcataagcaaagctttactaaa
gagcaaaaggataaaaggtatcatcaactatttcttgctaaaaatccagaagggtatcaa
aacctagtgaaattatgttctctgggatttatggaaggcatgtattccaaatatcccagg
atagataaagagttagttttgaaataccataaaggcttgattgctactacttgttgttta
ggagccagtgtccctcaagctattttgcgttctggagaagctgaagctgaaaaggaattt
aaatggtggttggatttatttggagaggattattacatcgaagtacagaatcaccatatt
ccagagcaacaaaccgtcaatgaagtcttgttacgatttgccaagaaatataatgtgaaa
gttattgcttccaatgatagccattatttggatcaaaaagatgccaatgcacatgatatt
ttattgtgtatcaatactggagaaaagcagtccactcctacttataaggatatagaaggt
gattttgacatgaaaggaaagcgttttgctttttataatgatcaattttatttcaagaca
acagaggaaatgacccaattatggtcacacattcctgaggccatagacaataccaatgaa
atcgttggtaaagtggaaaccttggaattgaaaaaagacgtgctattacccaattttcaa
attccaagtacctttttaagtcaagatgatttcttagaacacttgaccatggaaggcgct
aaaaagcgttatttggatattaatcaagagattgaagagcgtttgagatttgaattgcat
accattcggaccatgggatttgcgggttatttcttaattgtagccgatttcattaatgca
ggtaaggatttgggtgtttatgtgggccctggtcgtggatctgcagcaggttccgtagtg
gcatattgtttgggtataactaatatcgaccccattaagtacaatctgctatttgaacgt
ttcttgaatccagatcgtaagtcattacccgatatagatacggactttgacgatgaaggt
cgacaaaaagtcattgattatgtagtcgagaaatacggtcgcaaccaagtagcacatata
gccacctacggtactatggctgccaaaatgtccattaaagacgttgctcgtgtattggat
ttgcctctttctgaatccaatgctttggccaaattggtgccagataagccgaaaatatcc
ctggaacgtgtgataaatgcaccattaacaggagatggcagtttggcagataaagaaaat
ttatcgagtgaggaattagagcaagtgaagcaattaaggcaaataaaggccgatggaggt
ttagcctctcgggttattgaaaatgccttggttttggaaggttctgttcgaggaacagga
attcacgcggcgggtatcatcattgctcccaacgatttaacagatattttacccgttgcc
acatcgaaagacgtcactttattgattacccaatttgatggttctgttatcgaaaacgcg
ggtgttattaaaatggactttttgggcttaaaaaccttatccattttaaaggaagctatt
cgcttaatcaagcaaaaccatggaatcatcattgatttggacagtcttccactggatgat
gtaaaaacttttgaattgtatcaaagagctgaaaccaatggtacattccagtttgaatct
cctgggatgcaaaagcacctcaaagatttaaagcccgatcagttttctgatttgattgcc
atgaatgccttgtttagaccaggtcctatggtttatattcccaattacattgctcgtaag
catggaagggaaaagattgaatacgatttgccagaaatggaagagtatttaagtgataca
tatggtattactgtttaccaagagcaggtgatgttgctttctcagaaattggccaatttc
accaaaggtgatgcggatgttttgagaaaggccatgggtaaaaaggataaggctacgatt
gataaaatgaagggtaagttcatggaaggtggacaagctaatcaacatcctgccgatcga
ttggagaaaatatggactgactgggaagcatttgctcaatatgcctttaacaaatcgcac
tcaacgtgctatggcttagtggcttaccaaacaggatacttaaaagcaaactatccttct
gagttcatggccgcggtactttccaattccttgggaaatattgagaagataacattcttc
atggacgaatgtaaacgcatgggaataccattattggttccagatgtgaatgaatcggaa
aggtattttgcggttaataaaaaggggcatattcgttttggtctgggtgccatcaaaggt
gtgggagaagcagccgtagacgccattgtggaagagcgggctaaaaatggggagtatacc
gatatttttgattttgtttcaagaatcaatgtgcgtcaggtgaataagaaaagtttagaa
tccttggcattcgccggtgcttttgactgtttttcagaaatacctcgctcccattatttt
tatgtggatcaagagaataccacttttattgagaagattgtcagatatgcctcacgcatg
gctgagttaaaagctagcgctacccagtctttgtttggcgaattgggtgctggaacaggc
aatgacatcgccaaacctagaattcctaccgctgaggcctggtcagtgatggagcaattg
aaaaatgaaaaagaagtggtaggtgtctatatttcaggacatccattggatgaataccga
atagaaatcaataatttctgtaattctagtgtctctcaattggaattaaaagggggaaat
gtacagtcatttgctggtattgtaaccaaaatgaatgtgagaacctctggaaatggaaat
caattcatgattttcagtttggaagattttactggaaccaccgagtttgctctttttgct
aaggattatattgagtttgagcgttttattggactcgaccggcttttatttatacaggga
gtttataaaaataaaaactcgtattcagatcaaaaagcattcaaaattcaatccattgag
ctattatcagaaattttgtcttcgaggaccaaggaaatgaaactttctttgaacttacat
agtttaaacaaaacttcactagattatttactagaaaccttagaaagacataagggaaac
aaaaagctagtgatcgaggtatatgatgaggttgaaagattgcaacttgattttatgtcg
cgtaaaatgcaattgaatatagaaaagtctttaatggacgaattggctgaaatagagaac
attacagtaaagttgatatcttaa
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