Aquirufa nivalisilvae: HME7025_01542
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Entry
HME7025_01542 CDS
T05454
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
psez
Aquirufa nivalisilvae
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psez03009
]
HME7025_01542 (rumA)
Enzymes [BR:
psez01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HME7025_01542 (rumA)
Ribosome biogenesis [BR:
psez03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HME7025_01542 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
MTS
PrmA
Methyltransf_11
PCMT
Methyltransf_15
TRM5-TYW2_MTfase
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AWL09397
UniProt:
A0A2S2DX98
LinkDB
All DBs
Position
complement(1751332..1752753)
Genome browser
AA seq
473 aa
AA seq
DB search
MSARKYKIPQVLEQISILDFAAEAKCIAKVNDEVIFVQGTVAPGDIADLRILKSKKKFKQ
AQAINIQALSPFRTDAPCTHFGVCGGCKWQHVSYEAQLAFKQRQVKDNLERIAKVKLPEF
QPILGSDEAYYYRNKLEFTFSSSRWLTIEEIGKDNLGSMNALGFHVPGRFDKILPVDHCY
LQPDPSNAIRNGVRDFAEANGISFYELKNQQEGALRNLIIRNASSGEWMVVVQFAYATEE
EISLVMNYLKSNFPMITSLNYVVNQKGNDTFHDLDVICFHGKPFIEEQMEDLRFQIGPKS
FFQTNAKQALRLYQLVREYADLQGDELVYDLYTGTGTIALFLAKYAAKVVGLEYVEMAVE
DAKMNAIHNKIDTASFFAGDMKKLLTEEFIALHGKPQVVITDPPRAGMDEDVVRQILQVR
PEKIVYVSCNPATQARDLAWLDEAYEVDVVHPVDMFPQTHHVENIVRLRLRKS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccagaaaatataaaatcccccaagtcctagaacaaatttccatccttgatttc
gcagctgaagctaaatgcattgcgaaggtaaacgatgaagttattttcgtacaaggtacg
gttgcccctggtgatatagccgatttacgtattcttaagtcgaaaaagaaattcaaacaa
gctcaggcgatcaacattcaagcactgtctccttttaggactgatgctccttgtactcat
tttggcgtatgcggtggatgtaaatggcaacacgtttcttatgaagctcaattagctttc
aaacagcgccaagtgaaggataatttagagcgaattgctaaagttaaattgcctgaattt
caacctattttaggttctgatgaggcatattattaccgtaataaattagaattcacattt
tcatcttctcgctggttaaccattgaagagattggaaaagataatttaggttccatgaat
gccctaggattccacgttcctggtcgtttcgataaaatattacctgtagatcactgttat
ttacaacccgatccttccaatgccattcgaaatggtgttcgtgattttgcagaagccaat
ggaatttcattttatgaattaaaaaatcaacaagaaggcgctttacgtaacctgattata
cgaaatgcaagttctggtgaatggatggtggtcgtacagtttgcttatgctacggaggaa
gaaattagcttggtgatgaattacctaaaaagcaatttcccaatgattacttctttgaat
tatgtggtgaatcaaaaaggaaatgatactttccatgatttggatgtcatttgttttcat
ggtaagccatttattgaagaacaaatggaagatttgcgttttcagattgggcctaaatcc
tttttccaaaccaatgccaaacaagctttacgtttatatcaattggttagagaatacgct
gatttacaaggagatgagttagtgtatgatttgtatactggaacaggaactattgctttg
tttttggccaaatatgcagccaaagtagtaggattagaatatgtagaaatggcagtagaa
gatgccaaaatgaatgcaattcataataaaatagatacagcttccttctttgcaggtgat
atgaaaaagcttttaacagaagaattcattgcgcttcatggaaaacctcaagtggttata
actgaccctcctcgggctggtatggatgaagatgtggttcgtcaaattcttcaagttcgc
cccgaaaaaattgtctatgtaagttgtaatccagctacacaagcacgtgatttggcttgg
ttagatgaagcgtatgaggtggatgttgttcatcctgtcgatatgtttccgcaaacacac
catgttgaaaacatcgttcgcttacgactaagaaaaagctag
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