Aquirufa nivalisilvae: HME7025_01948
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Entry
HME7025_01948 CDS
T05454
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psez
Aquirufa nivalisilvae
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psez03032
]
HME7025_01948 (gyrB)
03400 DNA repair and recombination proteins [BR:
psez03400
]
HME7025_01948 (gyrB)
Enzymes [BR:
psez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HME7025_01948 (gyrB)
DNA replication proteins [BR:
psez03032
]
Prokaryotic type
DNA Topoisomerases
HME7025_01948 (gyrB)
DNA repair and recombination proteins [BR:
psez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HME7025_01948 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AWL09797
UniProt:
A0A2S2DYF3
LinkDB
All DBs
Position
complement(2279124..2281091)
Genome browser
AA seq
655 aa
AA seq
DB search
MSEAQDSAAQDRANYGADNIQVLEGLEAVRKRPSMYIGDTGFKGLHHLIWEVVDNSIDEA
LAGHCDLIKVTINTDNSILVEDNGRGIPTGMHTKEKRSALEVVMTVLHAGGKFDKDTYKV
SGGLHGVGVSCVNALSTDLKVTVQREGKIFQQEYKIGVPQYPVKEVGTTDKTGTSVLFKP
DESIFTVTEYKYETVAGRLRELSFLNAGIRVFLTDLRELDENGVAKSEEFFSEGGLREFV
TYLDATREPLFAEPIYMEGDKNGVPVQVAMLYNTSYSENVVSYVNNINTIEGGTHVAGFR
GALTRTLKNYADKSGALEKLKIDIAGDDFREGLTAVISVKVAEPQFEGQTKTKLGNGEVS
GAVSAAMSDMLESWLEEHPKEARQIVAKVILAAQARHAARKAREMVQRKTVLGSNSLPGK
LADCSDSDPEICELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAQEYRIYENEE
IKNMMTALGVFFGKDGDEKALNIDKLRYHKIIIMTDADVDGSHIRTLILTFFFRYMRPLV
DNGYIYIAQPPLYQVKKGQNVRYVWTENQRDQAVQELAGGGKEDNVGVQRYKGLGEMNAE
QLWETTMNPESRTLKQVTIDSAIEADLLFSMLMGDEVAPRRDFIEKNAKYAKVDV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagcacaagattcggcggctcaagatagagcaaattacggtgcagataatatc
caagttttagaaggtttagaggcggttcgtaagcgtccatccatgtacatcggtgatacc
ggatttaaaggtctacatcacttgatttgggaggttgttgataactccattgatgaggct
ttagcgggtcattgtgatttgattaaagtaaccatcaataccgataattctattttggta
gaagataatggtcgtggtatcccaacaggcatgcatacgaaggagaagcgttcagctttg
gaagtagtaatgaccgtgttacatgctgggggtaaatttgataaagatacttacaaggtt
tcagggggtcttcacggggtcggtgtttcctgtgtgaatgccttatctactgatttgaag
gtaactgttcaaagagaaggaaagattttccagcaagaatataaaattggtgttcctcaa
tatccagtaaaggaagtaggtacaacagataaaacaggtacttccgttttgtttaaacca
gatgaaagtatttttaccgttactgaatacaaatatgaaacagtagcaggtcgtttgcgt
gaattatcctttttgaatgctggtattcgcgtgtttttaacggatttgcgggagttggat
gaaaatggtgtagctaaatcggaggagtttttctctgaaggtggtttgcgtgaatttgtc
acttatttagatgctactcgtgagcctttatttgcagagccgatctacatggaaggtgat
aaaaatggggttccagttcaagtagccatgttgtacaatacctcttattctgaaaatgtg
gtttcctatgtgaacaacatcaataccattgaaggaggtacccacgtagctggttttaga
ggagctttgactcgtacgttgaaaaactatgcggataaatcaggtgctttagaaaagctt
aagattgatattgcaggagatgattttagagaaggtctaacggctgttatctccgtgaaa
gttgccgagcctcagtttgaaggacaaaccaaaaccaaattgggtaatggtgaggtatct
ggagcggtttctgcggctatgtcagacatgttagagtcttggttagaagaacatcctaaa
gaggctcgtcagattgtagctaaagttattttagcggctcaagcgagacatgctgctcgt
aaggcacgtgaaatggttcaaagaaaaacggttttaggttctaactcgttgcctggtaaa
ctggccgattgctcagattctgatcctgaaatttgtgagttataccttgtcgaaggagac
tcggcgggtggtactgccaagcaaggacgtaatcgtgcatttcaagctatcttgccattg
cgaggtaaaatcttgaacgttgaaaaggcacaagaatatcgtatctatgagaatgaggag
atcaaaaatatgatgaccgctttgggagtcttttttggtaaggatggagatgagaaggcc
ttgaatatagataaattacgttatcacaagatcatcatcatgacggatgctgacgtggat
ggaagccacattcgtaccttgattttgacattcttcttccgttacatgcgtccattggtg
gataatggctatatctatattgctcaacctccattgtaccaagtgaaaaaaggtcaaaat
gtacgttacgtgtggactgaaaatcaacgtgatcaagctgtacaagaattagctggcggt
ggaaaggaagataatgtaggtgttcagcgttataaaggtttgggagagatgaatgcggag
caattgtgggaaactacaatgaatccagaatcaagaaccttgaagcaggtaaccatcgat
tcagccattgaagcagatttattgttctcgatgttgatgggagatgaagttgcgccacgt
agagatttcattgaaaaaaatgctaaatacgccaaagtagacgtttag
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