Aquirufa nivalisilvae: HME7025_02297
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Entry
HME7025_02297 CDS
T05454
Symbol
recQ
Name
(GenBank) DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psez
Aquirufa nivalisilvae
Pathway
psez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HME7025_02297 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psez03019
]
HME7025_02297 (recQ)
03400 DNA repair and recombination proteins [BR:
psez03400
]
HME7025_02297 (recQ)
Enzymes [BR:
psez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HME7025_02297 (recQ)
Messenger RNA biogenesis [BR:
psez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HME7025_02297 (recQ)
DNA repair and recombination proteins [BR:
psez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HME7025_02297 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AWL10139
UniProt:
A0A2S2DXR8
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All DBs
Position
2704955..2706877
Genome browser
AA seq
640 aa
AA seq
DB search
MQDIHAILKKYWNYDSFRPLQEEIIHSILDKKDTLALLPTGGGKSICFQVPAMAMDGICI
VISPLIALMQDQVNQLKQRNIAAEALYSGMHPRQIDILLDNCIYGNIKFLYVSPERLKTE
LFLERAKQMNISLIAVDEAHCISQWGYDFRPSYLEILTFKNLFPNTPCMALTASANPEVK
ADILQKLEFKKPQIFQKSFSRANLSYSVLWEENKEKKLIQMLQRVPGSSIIYVRNRKKTQ
QVSDLIQQNGISSTFYHAGLDPKERSSRQKEWIEGKIQTIVATNAFGMGIDKADVRLVVH
LDLPDSLEAYYQEAGRAGRDEKKAYAAILVEEKDILDLQAQWSKSYPDADELKKVYQAIS
NYLQIPEGSGELMHYDFEWSEMANRFNLPSSETFFALKTLENEGLILLNDAYQNPSKIKF
NVSATELYDFQIRNERFESFIKCLLRMFGGNLYQQFVPISEGAIAQQFKAPIAEVERSLA
LLEKFEILDYDKQNGLPKLTLLSPRASASQLPIDWTSYHQKKDRSQTKIKAVEHYVRDKK
ICRTRLLVAYFGESLDKNCGICDTCIAQKKASTGKAYPESHESDRKLILHYLQHGSLSLQ
TLVDCLRPLSKDEAIRIIQYALDIGEITYTATDELGLASS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatatccacgccattcttaaaaaatattggaattacgactcttttcgtccactt
caagaagagatcatccactccatattggacaaaaaagacacattggctttattgcccact
ggtggaggtaaatccatttgctttcaagttcctgccatggccatggatggcatatgcatc
gttatttctcctttgattgcattaatgcaagatcaagtaaaccagttaaaacaacgaaat
attgcagcagaagccctctattctggcatgcatcctagacaaatcgatatactacttgat
aattgtatatatgggaatatcaagtttttatatgtttccccagaaagactaaaaaccgaa
ttatttctggaaagagctaagcaaatgaatatttcgctcatcgcagtagatgaagcacat
tgtatatctcaatggggatatgattttcgcccatcctatttggaaattctaactttcaaa
aacttatttccaaatactccttgcatggccttaactgctagtgcaaatcccgaagttaaa
gctgatatcctccaaaagctggagttcaaaaaacctcagatcttccagaagagcttcagt
cgggctaacctttcttattctgttctctgggaagaaaataaagaaaaaaaactgatccaa
atgcttcaacgcgttcctggatcttccattatttatgttcgaaatagaaaaaagacccag
caagtcagtgacctaattcaacaaaatggaatttcatctaccttttaccatgctggccta
gacccaaaagaaagaagttcccggcaaaaagaatggattgaaggtaaaattcagaccatt
gtagccaccaatgcctttggaatggggatcgataaagctgatgttcgcttggttgtccac
ttagatttgcccgattcattagaagcctattatcaggaggctggtcgggctggtcgggat
gaaaagaaagcttatgccgccattttagtagaggaaaaagacatattagatcttcaagcc
cagtggtcaaaatcttacccagatgccgatgaactaaagaaagtctaccaggccattagt
aattatttacagatccctgaaggaagtggagaactcatgcactatgattttgaatggtct
gaaatggccaatcgattcaacctcccttcatcagaaacattttttgccctaaaaacactg
gaaaatgaaggcttaattttgttgaatgatgcctaccaaaatccctccaaaattaaattc
aatgtttcagccacagaattatacgatttccaaattcgcaatgaacgttttgaatcattt
atcaaatgtcttttacgcatgtttggaggaaatctctaccagcaatttgtcccaatttca
gaaggggctattgcacaacaattcaaagctccaattgcagaagtagaacgtagcttagct
ttgcttgaaaaatttgaaattttggattacgacaagcaaaatggattacccaaattaaca
ctactcagcccgagagcctccgcatctcaattacctattgactggacttcatatcaccaa
aagaaagaccgaagccagactaaaattaaggccgtcgaacattatgttcgagataaaaaa
atatgtcgaacccgtttgctcgttgcctattttggagaaagtttggataaaaattgtgga
atctgtgatacttgtattgcacaaaaaaaggcctccactgggaaggcctatcctgaaagt
catgaaagtgaccgtaaactaatcttacattacctccaacatggttcattaagcttacaa
acgctagtcgattgcctccgccctctttccaaagatgaagccattcgcatcattcaatat
gcgttggatatcggtgaaatcacctatactgccacagacgaattaggcttagcctcatcc
tga
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