Aquirufa nivalisilvae: HME7025_02410
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Entry
HME7025_02410 CDS
T05454
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psez
Aquirufa nivalisilvae
Pathway
psez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HME7025_02410 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psez03021
]
HME7025_02410 (rpoA)
03400 DNA repair and recombination proteins [BR:
psez03400
]
HME7025_02410 (rpoA)
Enzymes [BR:
psez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HME7025_02410 (rpoA)
Transcription machinery [BR:
psez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HME7025_02410 (rpoA)
DNA repair and recombination proteins [BR:
psez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HME7025_02410 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Rib_mS39_PPR
Motif
Other DBs
NCBI-ProteinID:
AWL10251
UniProt:
A0A2S2DXW4
LinkDB
All DBs
Position
complement(2834723..2835712)
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKADDFHGTFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKIS
GVLHEFSAIEGVHEDVSEIILNLKKIRLKKAQEILENKVNIKVKGQTAFTAGDIAKFTPY
FTVLNPDLVICNLDSSKELEVELIIEKGRGYVPADEPRANELAFGHIAIDAIYTPIKNVK
FSIENTRVEQKTDYEKLVLDIETDGSIHPEDALKGAAYILIQHFMLFSDQTMTFETPKAE
EDNVVDEEMLHMRKLLKTSLADLDLSVRAYNCLKSADVRTLGELVKLEISDMMKFRNFGK
KSLTELEQLVEEKGLTFGMDVAKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattagcattccaaatgcccgagaaagttgtgatggagaaagccgatgacttc
cacgggacatttgagttcaagccactcgaaaaaggctacggtgttaccattggtaacgca
cttcgtagaattttactttcctctttggaaggttatgcgattacaagcgttaagatttct
ggtgttttacacgagttttcagcaattgaaggtgttcatgaagatgtttctgaaatcatc
cttaacttgaagaagattcgtcttaaaaaggcgcaagagattttggagaataaagttaat
atcaaagtaaaaggccaaacagcctttactgctggtgatatagctaaatttacgccttat
tttaccgttttaaatcctgatttagtgatttgcaacttggattcttctaaagaattagaa
gttgagttaatcatcgaaaaaggtcgtggatatgtaccagctgatgagcctcgtgctaat
gagttagcttttggtcacatcgccattgatgccatctacactcctatcaaaaatgttaaa
tttagcattgaaaatacccgtgtagagcaaaaaactgactacgaaaaattagtgttagat
atcgaaacagatggttctatccatccagaagatgcattgaaaggtgccgcttatatctta
atccaacacttcatgttattctctgatcaaacaatgactttcgaaacgccaaaagcggag
gaagacaatgttgtagacgaagagatgttacacatgcgtaaattattgaagacttcttta
gccgatctagatttatctgtacgtgcttacaactgccttaaatcagctgatgttcgcact
ttaggagaattagtgaaattagagatctctgatatgatgaagttccgtaactttggtaaa
aagtcattaactgagctagaacaactagtagaagaaaaaggcttaacctttggaatggat
gttgcgaaatatcgtttagacgaagattaa
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