Entry
Name
(GenBank) 2',5' RNA ligase
KO
Organism
psf Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:psf00001 ]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:psf03016 ]
PSE_0038
Enzymes [BR:psf01000 ]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PSE_0038
Transfer RNA biogenesis [BR:psf03016 ]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PSE_0038
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
complement(40605..41141)
Genome browser
AA seq
178 aa AA seq DB search
MPRLFTGLELPSSTGMMLSLMRGGLRGARWVDPENYHITLRFIGDIDDRIADEVAYELAR
VHRAPLTIKLTGLGTFGGSKPHALWARVEPTQELAELQAEQERILQRLGLQAERRKYTPH
VTLARLRGTSAGELAHWLEMRGEFSAPAFTAGRFVLYSAKAAVGGGPYLVEESYPLAA
NT seq
537 nt NT seq +upstream nt +downstream nt
atgcctcgtctttttactggccttgagctgccatcgagcaccgggatgatgttgagcctc
atgcgcggaggactgcgcggcgctcgttgggtcgaccccgaaaactaccacatcacattg
cgatttattggcgacatcgatgatcgcattgccgatgaagttgcctatgagctggcgcgg
gttcatcgcgcaccgctgacgatcaagctgaccgggcttggaacgtttgggggaagcaag
cctcatgcactttgggcgcgtgtagagccgactcaagaacttgcagagttgcaagcggag
caagagcgtattttgcaacgtctcggcctacaagcggaacgtcgcaagtacacaccgcat
gtgactttggctcgattgaggggaacttcagccggagaactggcgcattggcttgagatg
cgtggtgagttctctgcgcctgcgtttaccgctgggcggtttgtgctctactccgcgaaa
gcggcagtgggtggcggaccgtatctggtggaggagagctatccgctggctgcttga