KEGG   Pseudovibrio sp. FO-BEG1: PSE_0038
Entry
PSE_0038          CDS       T01669                                 
Name
(GenBank) 2',5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
psf  Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:psf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psf03016]
    PSE_0038
Enzymes [BR:psf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     PSE_0038
Transfer RNA biogenesis [BR:psf03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    PSE_0038
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: AEV34550
UniProt: G8PFL2
LinkDB
Position
complement(40605..41141)
AA seq 178 aa
MPRLFTGLELPSSTGMMLSLMRGGLRGARWVDPENYHITLRFIGDIDDRIADEVAYELAR
VHRAPLTIKLTGLGTFGGSKPHALWARVEPTQELAELQAEQERILQRLGLQAERRKYTPH
VTLARLRGTSAGELAHWLEMRGEFSAPAFTAGRFVLYSAKAAVGGGPYLVEESYPLAA
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcctcgtctttttactggccttgagctgccatcgagcaccgggatgatgttgagcctc
atgcgcggaggactgcgcggcgctcgttgggtcgaccccgaaaactaccacatcacattg
cgatttattggcgacatcgatgatcgcattgccgatgaagttgcctatgagctggcgcgg
gttcatcgcgcaccgctgacgatcaagctgaccgggcttggaacgtttgggggaagcaag
cctcatgcactttgggcgcgtgtagagccgactcaagaacttgcagagttgcaagcggag
caagagcgtattttgcaacgtctcggcctacaagcggaacgtcgcaagtacacaccgcat
gtgactttggctcgattgaggggaacttcagccggagaactggcgcattggcttgagatg
cgtggtgagttctctgcgcctgcgtttaccgctgggcggtttgtgctctactccgcgaaa
gcggcagtgggtggcggaccgtatctggtggaggagagctatccgctggctgcttga

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