Pseudovibrio sp. FO-BEG1: PSE_0327 Help Entry PSE_0327          CDS       T01669                                  Name (GenBank) tryptophan synthase subunit beta   KO K01696   tryptophan synthase beta chain [EC:4.2.1.20] Organism psf  Pseudovibrio sp. FO-BEG1 Pathway psf00260   Glycine, serine and threonine metabolism psf00400   Phenylalanine, tyrosine and tryptophan biosynthesis psf01100   Metabolic pathways psf01110   Biosynthesis of secondary metabolites psf01230   Biosynthesis of amino acids Module psf_M00023   Tryptophan biosynthesis, chorismate => tryptophan Brite KEGG Orthology (KO) [BR:psf00001]  09100 Metabolism   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     PSE_0327    00400 Phenylalanine, tyrosine and tryptophan biosynthesis     PSE_0327 Enzymes [BR:psf01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.1  Hydro-lyases     4.2.1.20  tryptophan synthase      PSE_0327 SSDB OrthologParalogGFIT Motif Pfam:  PALP C2c1_WED-II Motif Other DBs NCBI-ProteinID:  AEV34839 LinkDB All DBs Position complement(318263..319477) Genome browser AA seq 404 aa AA seqDB search MNQQANTLRSGPDDRGHFGDFGGRFVAETLMPLILDLEKAYNEAKADPAYAAELKNLNTH YTGRPSALYFAERLTEELGGAKIYFKRDELNHTGSHKINNCIGQILLAKRMGKTRIIAET GAGQHGVATATVCARFGLPCVVYMGATDVERQKPNVFRMKLLGAEIVPVTAGAGTLKDAM NEALRDWVTNVEDTYYLIGTAAGPHPYPEMVRDFQSVIGEETKKQLMEVEGRLPDALVAA VGGGSNAIGLFHPFLDDPSVEIYGVEAGGKGLEGEEHCASLNAGKPGVLHGNRTYLLQDD DGQILEGHSVSAGLDYPGIGPEHSWLKDTGRVNYVPATDTEALDAFQMLTRVEGIIPALE PSHALAQVIKMAPQMDKDQIIVMNLCGRGDKDVFTVGKLLGFDL NT seq 1215 nt NT seq  +upstreamnt  +downstreamnt atgaaccagcaagccaacacattgcgttccggtccggatgatcgcggccactttggtgat tttgggggtcgtttcgtcgctgaaacgctcatgcctttgatcctggatctggaaaaggct tacaacgaagctaaggctgatccggcatatgcggcagagctgaaaaacctgaacacccat tataccggtcgcccatctgcgctgtattttgctgaacgcctgactgaagagctgggcggc gcaaagatctacttcaagcgcgatgagctgaaccacaccggatcgcacaagatcaacaac tgtattggccagatcctactggctaagcgtatgggcaaaacccgcattattgctgagacc ggtgccggtcagcatggtgtggcaactgctacagtttgcgcgcgttttggtctgccttgc gtggtttacatgggggcaacagacgttgagcgtcagaagccaaacgtattccgcatgaag cttctgggcgctgaaattgttcccgttactgctggagcgggtacactgaaagatgcgatg aacgaagcgctgcgtgattgggtgaccaacgtggaagacacgtattacctgatcggtaca gctgctggtccgcatccttatccagaaatggttcgtgacttccagtcagtgattggtgaa gagaccaaaaagcagcttatggaagtggaaggcagacttcctgatgcacttgtcgctgct gttggtggtggttccaacgcgattggcctgttccatccattccttgatgatccttccgtt gaaatttacggcgttgaagctggtggtaaaggtctggaaggtgaggaacactgcgcatct ttgaatgcgggtaagccgggcgttttgcatggcaatcgcacttacctgctgcaggatgat gacggtcagatccttgaaggacactccgtttctgctggtctggactatccaggcattggc cctgagcactcctggctgaaagatactggccgtgtgaactacgttcctgcgactgacaca gaagctctggatgcattccagatgctgacccgtgttgaaggcatcattccggctctggaa ccaagccacgcgctggctcaggttatcaagatggcgccgcagatggacaaagaccaaatc atcgttatgaacctttgtggtcgcggtgataaggacgtcttcaccgtcggtaagctcctc ggctttgacctgtaa

Pseudovibrio sp. FO-BEG1: PSE_0341 Help Entry PSE_0341          CDS       T01669                                  Name (GenBank) tryptophan synthase subunit alpha   KO K01695   tryptophan synthase alpha chain [EC:4.2.1.20] Organism psf  Pseudovibrio sp. FO-BEG1 Pathway psf00260   Glycine, serine and threonine metabolism psf00400   Phenylalanine, tyrosine and tryptophan biosynthesis psf01100   Metabolic pathways psf01110   Biosynthesis of secondary metabolites psf01230   Biosynthesis of amino acids Module psf_M00023   Tryptophan biosynthesis, chorismate => tryptophan Brite KEGG Orthology (KO) [BR:psf00001]  09100 Metabolism   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     PSE_0341    00400 Phenylalanine, tyrosine and tryptophan biosynthesis     PSE_0341 Enzymes [BR:psf01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.1  Hydro-lyases     4.2.1.20  tryptophan synthase      PSE_0341 SSDB OrthologParalogGFIT Motif Pfam:  Trp_syntA His_biosynth PcrB BtpA DUF7504 Motif Other DBs NCBI-ProteinID:  AEV34853 LinkDB All DBs Position complement(336824..337654) Genome browser AA seq 276 aa AA seqDB search MIETRIDRRFAKLKAEGRPALVTFITAGDPDLATSQAILDALPEAGSDVIELGMPFSDPM AEGVPIQLATQRSLAHGHTMDKTLQMVREFRKKDNDTPIVLMGYYNPIYVRGSAAFVKEA REAGVDGLIVVDVPAEADDELCIPAIEGGVNFIRLTTPTTDDKRLPTVLANTSGFVYYVS VTGVTGSAAADTTAVAQAVTRIKSHTDLPVAVGFGIKTAEQAEEIGKHADGVVVGSILVE AIRKSLDENGKATNQTQAAVTDLVSSLRVGVEKARK NT seq 831 nt NT seq  +upstreamnt  +downstreamnt atgattgaaactcgtattgatcgacgcttcgcaaagctcaaggctgaaggtcgtcctgca ctcgtaacttttattacggctggagacccggacctcgccacctcacaagctattctggat gctcttccggaagcaggcagtgatgttatcgagcttggcatgccgttttccgacccgatg gctgaaggtgttccaatccagctggcgactcagcgctctctggcgcatggtcacaccatg gacaagacccttcagatggtgcgtgagttccgtaaaaaggacaatgacaccccaatcgtt ctgatgggttattacaacccgatctatgtacgcggcagcgcagcgtttgtgaaagaagcg cgcgaagctggcgttgatggcctgattgttgttgatgtgcctgctgaggcagatgatgaa ctctgcattccggcaattgagggcggtgtaaacttcattcgcctgaccacaccaacaact gacgacaagcgcctgccaaccgttctggcgaacacctctggattcgtttattacgtgtcc gttaccggtgttaccggatctgctgctgcagacacaaccgccgttgcacaggcggttaca cgaattaaatcccacacagaccttcctgtagccgttggcttcggcattaaaactgctgag caggctgaggaaattggcaaacacgctgatggtgtggtagttggctccatccttgttgag gcaattcgcaagagccttgatgagaatggtaaagccacaaatcagacacaagctgctgtt accgaccttgtgagctcactacgtgtgggtgtagaaaaagctcggaaataa

Pseudovibrio sp. FO-BEG1: PSE_2644 Help Entry PSE_2644          CDS       T01669                                  Name (GenBank) tryptophan synthase subunit beta   KO K01696   tryptophan synthase beta chain [EC:4.2.1.20] Organism psf  Pseudovibrio sp. FO-BEG1 Pathway psf00260   Glycine, serine and threonine metabolism psf00400   Phenylalanine, tyrosine and tryptophan biosynthesis psf01100   Metabolic pathways psf01110   Biosynthesis of secondary metabolites psf01230   Biosynthesis of amino acids Module psf_M00023   Tryptophan biosynthesis, chorismate => tryptophan Brite KEGG Orthology (KO) [BR:psf00001]  09100 Metabolism   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     PSE_2644    00400 Phenylalanine, tyrosine and tryptophan biosynthesis     PSE_2644 Enzymes [BR:psf01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.1  Hydro-lyases     4.2.1.20  tryptophan synthase      PSE_2644 SSDB OrthologParalogGFIT Motif Pfam:  PALP TrkA_N Motif Other DBs NCBI-ProteinID:  AEV37152 LinkDB All DBs Position 2803538..2804755 Genome browser AA seq 405 aa AA seqDB search MDNYLKEFPNKEGYFGEYGGAFLPPELVPQFEEIAKAYDKISGDASYINELRYIRKHFQG RPTPVSHARNLSNRIGSGANIYLKREDLNHSGAHKLNHCMAEALLAKHMGKKKLIAETGA GQHGVALATAAAYFELECEIHMGEVDIEKEHPNVVRMQLLGAKLVPVGFGGRTLKEAVDS AFTSYLEQADEALFAIGSVVGPHPFPRMVRDFQQIVGIEAREQFTEMTGNLPDHAVACVG GGSNAMGLFSGFIQDKSVKLHGVEPMGKGPELGQHAATMTFGKPGMLHGFKCRVLEDAEG NPAPVHSIASGLDYPGVGPEHSYLHDIGKVHYGSATDDETLQAFWVLSRYEGIIPALESS HAVAYAIKLAKECPGETILVNLSGRGDKDLDYVADNFGTGEDLKM NT seq 1218 nt NT seq  +upstreamnt  +downstreamnt atggacaattacttaaaagagtttccaaacaaagaaggctacttcggagaatacggtggt gcattcctgccgcctgagctggtacctcagttcgaagagattgccaaagcctatgacaag atctcaggcgatgcttcctacatcaatgagctgcgttacatccgcaaacactttcagggc cgtccaacgccagtttctcacgcccgcaacctatccaatcgcattgggtccggcgcgaac atatatctgaagcgggaagacctcaaccactccggcgctcacaagctcaaccactgcatg gcagaagctctgttggccaaacacatgggcaaaaagaagctcattgcggagaccggggca gggcagcacggcgtggccctggcaaccgcagccgcatattttgagctggaatgtgaaatc cacatgggtgaagtggatattgagaaagagcatccaaacgtagtccgtatgcagctgctc ggtgcaaagcttgtcccggttggtttcggtggccgtacactgaaagaggccgtggattca gccttcacctcctatctggagcaggcagatgaggctctgttcgcaatcggctctgtggtt ggcccgcatccattcccacgcatggtccgcgacttccagcagatcgtcgggatcgaggcg cgtgagcagttcacagaaatgaccggcaacctgccagaccacgccgtggcctgtgtcggc ggtgggtctaacgccatgggcctgttctccggcttcattcaggacaagtctgttaagctc catggcgttgagccaatgggtaaaggcccagagctaggccagcatgcagcaaccatgaca ttcggtaagccaggcatgcttcatggcttcaagtgccgcgttctggaagatgcagaaggc aatccggcaccagttcactcaatcgcatccggtctggattatccgggtgtcggccctgag cattcctacctgcacgacatcggcaaggtgcactacggctctgcaacggacgacgaaact ctgcaggcgttctgggtgctatcccgctatgagggcatcattccagcgctggaaagctcc cacgctgtcgcctacgccatcaagctggccaaggaatgtccgggtgaaacgatcctcgtg aacctgtccggtcgtggtgataaggatctggattatgtggctgataacttcggcacaggc gaagacctgaagatgtaa

Pseudovibrio sp. FO-BEG1: PSE_p0052 Help Entry PSE_p0052         CDS       T01669                                  Symbol tpl Name (GenBank) Tyrosine phenol-lyase   KO K01667   tryptophanase [EC:4.1.99.1] Organism psf  Pseudovibrio sp. FO-BEG1 Pathway psf00380   Tryptophan metabolism psf01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:psf00001]  09100 Metabolism   09105 Amino acid metabolism    00380 Tryptophan metabolism     PSE_p0052 (tpl) Enzymes [BR:psf01000]  4. Lyases   4.1  Carbon-carbon lyases    4.1.99  Other carbon-carbon lyases     4.1.99.1  tryptophanase      PSE_p0052 (tpl) SSDB OrthologParalogGFIT Motif Pfam:  Beta_elim_lyase SepSecS Aminotran_1_2 Motif Other DBs NCBI-ProteinID:  AEV39634 LinkDB All DBs Position unnamed:complement(51396..52796) Genome browser AA seq 466 aa AA seqDB search MKRIPEPFRIKMVEPIKMTSFADREKALAEAGYNPFLLASDDVYIDLLTDSGTGAMSDYQ WAGMMMGDEAYAGSRNFYNLKDAVHHFFRYEYLVPTHQGRGAEQILFPALIRRAKEVRGA DKHIFISNYHFDTTAAHVELNGGQAVNVVDERAYDTTTYYDWKGDFDLEKLEAAIKEHGA KNVTAIITTVTCNSSGGQPVSMANMRAVYEIGQKYDIPVVIDSARYCENAYFIKQREEGY ADKSITDIIREMYSYGDMLTMSAKKDPLVNIGGMCAIREKKELFQAVQTLCVPMEGFVTY GGLAGRDMEALARGLHEGADENFLHYRIGQVKYLGDRLVEGGVPIQYPTGGHAVFVDAKK ILPHIPGDQFPAQALCNALYLESGVRPVEIGSFLLGRDPATGQQKESPLELMRLTIPRRV YTNDHMDYIADALINVAKNAKDIKGFEFEYEPPVLRHFTARLKPIK NT seq 1401 nt NT seq  +upstreamnt  +downstreamnt atgaaacgtatccctgagccgttccgcatcaaaatggttgagccaatcaaaatgaccagt ttcgcagaccgcgaaaaggcattggcagaagctggctacaacccattcctgcttgcaagt gatgacgtttacatcgatcttctgacagactccggcacgggcgccatgtctgactaccag tgggcaggtatgatgatgggcgacgaagcctatgccggctcccgcaacttttacaacctg aaggacgcggttcatcacttcttccgttatgaatatctggtgccaacccaccaggggcgt ggtgcagaacagatcctgttccctgctctgatccgccgcgcgaaggaagttcgtggtgca gacaagcacatcttcatctccaactaccacttcgacaccacagccgcgcacgtggagctg aacggtggtcaggcagttaacgtggtggacgaacgtgcttatgacacaaccacttactac gactggaagggtgacttcgatctggagaagctggaagcggcgatcaaagaacacggcgcg aagaacgtcaccgcgatcatcaccacagtgacctgtaacagctctggcggtcagccagta tccatggcgaatatgcgcgctgtttacgaaatcggccagaaatacgacattccggttgtg atcgactccgcccgttactgcgaaaacgcgtatttcatcaagcagcgtgaggaaggttac gcggataagtccatcaccgacatcatccgcgagatgtactcctacggcgatatgctcacc atgtccgcaaagaaagacccgctggtcaacatcggcggcatgtgcgcaatccgcgagaag aaagagctgttccaggccgtccaaaccctctgcgtcccaatggaaggcttcgtaacttat gggggattagccggccgcgacatggaagcgctggcacgtggtctgcatgagggtgcggat gagaacttcctgcactatcgtattggccaggttaagtatttgggcgatcgtcttgttgaa ggcggcgtgccaattcagtacccaaccggtggtcacgcggtgttcgtagacgcgaagaag atccttccgcacatcccgggagaccagttcccggcgcaggctctgtgtaacgcgctgtac ctggaatccggcgtacgcccagttgaaattggctcattcttacttggccgcgatcctgca accggccagcaaaaagagtccccactggaactcatgcgcctcacaatcccacgtcgtgtg tacaccaatgaccacatggattacatcgcggatgctctgatcaacgttgcgaagaacgca aaggatatcaaaggcttcgagtttgaatacgagccacctgttctgcgtcacttcactgca cgtctgaagccaatcaagtaa

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