Pseudovibrio sp. FO-BEG1: PSE_0356
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Entry
PSE_0356 CDS
T01669
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf03030
DNA replication
psf03410
Base excision repair
psf03420
Nucleotide excision repair
psf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSE_0356 (polA)
03410 Base excision repair
PSE_0356 (polA)
03420 Nucleotide excision repair
PSE_0356 (polA)
03440 Homologous recombination
PSE_0356 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psf03032
]
PSE_0356 (polA)
03400 DNA repair and recombination proteins [BR:
psf03400
]
PSE_0356 (polA)
Enzymes [BR:
psf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSE_0356 (polA)
DNA replication proteins [BR:
psf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSE_0356 (polA)
DNA repair and recombination proteins [BR:
psf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSE_0356 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSE_0356 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_2
Complex1_49kDa
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEV34868
UniProt:
G8PJG2
LinkDB
All DBs
Position
353197..356139
Genome browser
AA seq
980 aa
AA seq
DB search
MIPLMSTQSIAPALTENDHLILIDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWK
MMQEGPTKEEGDEPTHFAVIFDKSGKTFRNDFYPEYKAHRPPPPEDLRPQFGLIRQATRA
FGVPAIEQQGYEADDLIATYARQAEAQGARVTIVSGDKDLMQLVTDKIGMVDTMKNKIIG
KPEVFEKFGVGPEKVVEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLDTLLEQAETI
KQKKRRENLIEFAEQARISKRLVQLEEAVPVETPVEDFSVCDVDGAQAVGFLKAMGFTSL
TKKVADKTGAVLENIEAADVVIEGWESTAKPAEQAEDSAGELEGKAWTAAPLAEKVAAEI
SALPIDNSAYETVSTVERLKEWIAEAYEVGYVAVDTETDALNAMEAGLVGVSLSCTPGKA
CYIPLAHVDGEGDLLGGGALLEGQIPLNEAIALLKPMLEDPAVLKIAQNMKYDWLVLKRY
GVEMAPFDDTMLLSYALDAGMGGNGMDELSQRWLNHTPIPFKEVCGSGKSQISFDKVPLD
KATAYAAEDADVTLRLWKILKPRLAAEEMTVVYERLERPMVATLAKMERRGISIDRQMLS
LLSGEFAQGAARLESEIHDVAGEIFNVGSPKQLGEILFGKMGLPGGKKTKTGAWSTSASV
LDDLAAQGHELPSKIVEWRQLSKLKSTYTDALPSFINQETGRVHTSFSLASTSTGRLSSS
EPNIQNIPIRTSEGRKIRQAFIAEKGKKLISADYSQIELRVLAHMADIPQLKQAFADGLD
IHAMTASEMFGVPIEGMDPMVRRRAKAINFGIIYGISAFGLANQLGIARGEAGDYIKTYF
ERFPGIKDYMEETKKFVHANGYVETIFGRRAHYPDVNTKNPNMRQFYERAAINAPIQGSA
ADIIRRAMVRMDEVLETANMDAQMLLQVHDELIFELPEDQVEETKKLVIATMEKATEPAL
QLSVPLKVEAEAADNWEEAH
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgctcatgtcgacacaatccattgccccagctctcacagagaacgatcacctc
atcctgatcgatggctctaccttcattttccgcgcatatcacgcgctgccgccgcttact
cgcaagcccgacggactgcccgttggcgcggtttccggcttctgcaacatgctctggaag
atgatgcaggaaggcccgaccaaggaagaaggcgacgagccaacacacttcgccgtgatt
ttcgataagtccggcaaaaccttccgcaacgatttctacccggaatacaaagcccaccgc
ccgccgccgccagaagacctgcgcccgcagtttggcctgatccgtcaggcaacgcgcgca
ttcggcgtgcctgccattgagcagcagggctatgaggccgacgatctgatcgccacctat
gcccgtcaggcagaggcacaaggcgctcgcgtcaccatcgtctccggcgataaagacctg
atgcagctcgtcaccgataagatcggcatggtcgataccatgaagaacaagatcatcggc
aagcctgaggttttcgagaagtttggcgttggtccggaaaaggtcgtcgaagtgcagtcg
ctggcaggcgatagcgtcgataacgtgccgggcgttccaggcattggcctgaaaaccgct
gctctgctcatcaatgagttcggtgatctggatacccttctggaacaagccgaaaccatc
aagcagaagaagcgccgcgagaaccttatcgagttcgctgaacaggctcgcatctccaag
cgccttgtacagctggaagaagccgtgccggtagaaacgccggttgaagacttctccgtt
tgcgacgttgatggcgcgcaggccgtcggcttcctcaaagccatgggcttcaccagcctc
accaagaaagtggcagataaaaccggcgccgtgctggaaaacatcgaagctgcggacgtt
gtcatcgagggttgggaaagcactgcaaaaccggcagaacaagctgaggattctgcggga
gaacttgagggtaaagcatggaccgccgcccctctggcagagaaagttgcagctgaaata
tctgcgcttcctatagataattccgcttacgaaacagtttccaccgtcgagcgcctcaaa
gagtggatagcggaagcctatgaagtgggctacgtggctgtggacaccgagacggatgcc
ctcaacgccatggaagctggcctcgtcggcgtctccctctcatgcacgccgggcaaggcc
tgctacatcccgctggcccacgtggacggcgaaggcgatctcctcggcggcggcgctcta
ctggaaggccagatcccgcttaacgaagccatcgccctgctcaagccaatgctggaagat
ccggcagtcctcaaaatcgcgcagaacatgaagtacgactggctcgtgctcaagcgctac
ggcgtggaaatggcgccgtttgatgacaccatgctgctctcctacgcgcttgatgcgggc
atgggcggcaatggcatggacgagctctcccagcgctggctcaaccacacgccaatcccg
ttcaaggaagtctgcggctccggcaaatcgcagatctccttcgataaggtgccactggac
aaagccaccgcctacgcggcggaagatgcagacgttaccctgcgcctctggaaaatcctc
aaaccacgcctcgccgctgaggaaatgacagtggtctatgagcgtctggaacgcccaatg
gtggcaacgctggccaaaatggagcgccgcggcatctccatcgaccgtcagatgctctcc
ctgctctccggtgagttcgcccaaggcgcagcgcgtctggaaagtgaaatccacgacgtc
gcaggcgaaatcttcaacgtcggttcgccaaagcagctgggtgaaatcctgttcggcaaa
atgggcctgcctggcggcaaaaaaaccaagactggcgcttggtccacctccgcctccgtg
ctggatgatctggccgcccagggccatgagctgccaagcaaaatcgtcgagtggcgccag
ctgagcaagctgaaatccacctacaccgacgcactgccaagcttcatcaatcaggagacg
ggccgcgtccacacctcgttctcgctggcgtccacctccacgggccgtttgtcctcttct
gaaccaaacatccagaacatcccgatcagaacctctgagggtcgcaaaatccgtcaggcg
tttatcgcggaaaagggcaagaagctcatttctgccgattacagccagatcgaactgcgc
gttctcgctcacatggccgatattccgcagctcaaacaggcatttgctgatgggctcgac
attcacgccatgacagcaagcgagatgtttggtgtgccgattgaaggcatggacccaatg
gtccgccgccgcgccaaagcgatcaacttcggcatcatctacggcatttccgcgttcggc
ctcgccaaccagctgggcatcgcacgcggtgaagcgggcgactacatcaaaacgtatttt
gaacgcttcccgggcatcaaagactacatggaagaaaccaaaaagttcgtccatgcaaat
ggttacgtcgaaaccatctttggccgccgcgcccactatccggatgtaaacaccaagaac
ccgaacatgcgccagttctacgagcgcgcagccatcaacgccccaattcagggttcagcg
gcagatatcatccgccgcgctatggtgcgtatggatgaggttctggaaacggcaaatatg
gacgcgcaaatgctgctgcaggtgcacgatgaattgatctttgaactgcctgaggatcag
gtggaagagaccaaaaaactcgtcatcgccaccatggaaaaagctacagaaccagccctc
cagctctccgtccccctcaaggtggaagcagaagccgcagacaactgggaagaggcgcac
tag
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