Pseudovibrio sp. FO-BEG1: PSE_0511
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Entry
PSE_0511 CDS
T01669
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psf03016
]
PSE_0511 (truB)
Enzymes [BR:
psf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSE_0511 (truB)
Transfer RNA biogenesis [BR:
psf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSE_0511 (truB)
Prokaryotic type
PSE_0511 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AEV35023
UniProt:
G8PL92
LinkDB
All DBs
Position
537100..538077
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AA seq
325 aa
AA seq
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MARRQQRRRPRFPVNGWLVLDKPLNLTSNDALGQLKRIFHPEKVGHAGTLDPLATGCLPI
AFGEATKTVPYIMDGRKVYRFEVTWGTQTTSDDAEGEPVKTSDVRPTQDEILSILPEFRG
RIEQVPPIFSAIKVDGNRAYDLARDGEDVKLEARVIEVHRLDLVECIDENRAVFEAECGK
GTYVRSLARDLGERLGTCGYVTDLRRLLVGPFGEEQMVTLDELRAAKEAMMVEVEEGEEP
PVLNPLENAELIGYIKPVETALHQFAEVRITGDAAAKVKRGNPVLLRGADAPIGPEEIYV
VSGGKLIAFGEVSKGEFKPKRVFNL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagacagcagcgacgtagaccccgtttcccggtaaacggatggcttgttctg
gacaaacctctgaacctgacttccaacgacgcgttgggccagctgaagagaattttccat
cctgaaaaggttggacacgcaggaacccttgacccgctcgcaactggctgcctgccgatt
gccttcggtgaggcgaccaaaaccgttccttacatcatggacggccgcaaggtgtaccgc
ttcgaggtcacttggggcacgcaaaccacctcggacgatgcggagggtgagccggtcaaa
acctctgatgttcgcccgacacaggacgagatcctctcgatcctgcctgagttccgtggt
cggattgaacaggttccaccaatcttctccgcaatcaaagtcgacggcaaccgtgcctac
gatctggcgcgtgatggcgaagatgtaaagctggaagcccgcgtgatcgaagtccatcgt
ctggatctcgtcgaatgcatcgatgaaaaccgcgcggtgttcgaagccgaatgtggcaag
ggcacctatgtgcgctctctggcccgtgatctcggcgagcgcctcggcacatgcggttac
gtgactgacctgcgccgcctgctggtgggaccattcggcgaagagcagatggttacgctg
gatgagctgcgtgcagcgaaagaagcgatgatggtagaggtggaagaaggcgaagagcct
cctgtcctcaacccgctcgaaaacgctgagctgattggctacatcaagccggttgaaacc
gctctgcaccagtttgcagaagtgcgcatcaccggcgatgctgccgcaaaagtgaagcgc
ggtaatccggttctgctgcgtggcgcagatgcaccgatcggcccggaagagatctatgtg
gtctcaggcggcaaactgatcgcgtttggcgaagtctccaaaggcgagttcaaaccgaag
cgggttttcaacctttaa
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