Pseudovibrio sp. FO-BEG1: PSE_0616
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Entry
PSE_0616 CDS
T01669
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf00020
Citrate cycle (TCA cycle)
psf00640
Propanoate metabolism
psf00660
C5-Branched dibasic acid metabolism
psf00720
Other carbon fixation pathways
psf01100
Metabolic pathways
psf01110
Biosynthesis of secondary metabolites
psf01120
Microbial metabolism in diverse environments
psf01200
Carbon metabolism
Module
psf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSE_0616 (sucD)
00640 Propanoate metabolism
PSE_0616 (sucD)
00660 C5-Branched dibasic acid metabolism
PSE_0616 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
PSE_0616 (sucD)
Enzymes [BR:
psf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PSE_0616 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AEV35128
UniProt:
G8PMX3
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All DBs
Position
636817..637740
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AA seq
307 aa
AA seq
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MSILVDKDTKVIVQGLTGKTGTFHTEQALAYFGTKMVAGVHPKKGGETWSSGLDSAAELP
IFASVKEAKEATGANASVVYVPPAGAAAAIIEAIDAEIPFIVCITEGIPVADMVKVKARL
DNSNSRLLGPNCPGVLTPEECKIGIMPGSIFKKGNVGIVSRSGTLTYEAVFQTSQEGLGQ
TTAVGIGGDPVKGTEFIDMLDLFLDDPETESIIMIGEIGGSAEEEAAEWLKEQAAKGRKK
PMVGFIAGRTAPPGRTMGHAGAVISGGKGGADDKIAAMEDAGIRVSPSPAKLGKTLVALL
EELKQGA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctcgtagataaagacaccaaagttattgttcagggtctgaccggtaaaacc
ggcacattccacactgagcaggcactggcatacttcggcaccaaaatggttgctggcgta
caccctaaaaaaggcggcgaaacttggtcttctggcctcgattccgcagctgaactgcca
atcttcgcttccgttaaagaagctaaagaggcaaccggtgcaaacgcttctgtagtttac
gttccaccagcaggtgcagcagctgcaatcatcgaagcaatcgacgcagaaatcccattc
atcgtttgtatcactgagggtatcccagttgcagacatggtgaaggtgaaagctcgcctc
gataactccaacagccgtctgcttggcccgaactgcccaggcgttctgacccctgaagaa
tgtaaaatcggcatcatgcctggttctatcttcaaaaagggtaatgttggcatcgtgtcc
cgctcaggtaccctgacttatgaagctgtgttccagacttctcaggaaggcctcggccag
accactgctgttggcatcggtggtgacccagttaagggcaccgagttcatcgacatgctg
gacctgttcctggatgatccagaaacagaatccatcatcatgatcggtgagatcggtggt
tctgctgaagaagaagctgctgagtggctgaaagaacaggctgctaaaggccgcaagaag
ccaatggttggcttcatcgcaggtcgtacagcgcctccaggccgtaccatgggtcacgca
ggtgctgtgatctctggcggtaaaggtggtgctgatgacaagatcgcagcaatggaagac
gcgggcatccgtgtttctccatcccctgcgaagcttggcaaaacccttgttgctcttctc
gaagaattgaagcaaggcgcttaa
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