Pseudovibrio sp. FO-BEG1: PSE_0658
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Entry
PSE_0658 CDS
T01669
Name
(GenBank) Double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psf03400
]
PSE_0658
Enzymes [BR:
psf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSE_0658
DNA repair and recombination proteins [BR:
psf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PSE_0658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
AAA_30
DEAD
NPHP3_N
Exo5
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AEV35170
UniProt:
G8PN15
LinkDB
All DBs
Position
681917..685387
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AA seq
1156 aa
AA seq
DB search
MDIPAKTLDSQQRAAHPENSAWVSANAGSGKTFVLARRVVRLLLSGTDPSRILCLTFTKA
AAAEMATRVFDSLAKWTQLSDAELAAEIEDIEGCPTSPKQLANARRLFAKALETPGGLKI
QTIHAFCEALLHQFPLEANVAGHFSVLDDRLAEELLNEARASILHRAEIKPESDIGSALS
QLIELLPDSGVEKALSELISRRDAFYRWVAPYGDLESAISALYADFSVIPEDDISDFASA
LRRKCSLTDDEVKAFAEALRVGSKTDQDRANALDQAITLKSDEAWRIAWLKIFLTGTLGP
RKSLATKKVQTAFPEVVERLFAEQLRVLEALQHQNAVITVSGTKAILILSDAVLRYYETE
KLRRGYLDFEDLVVKSAQLLSRAEAAQWVQYKLDQGLDHILVDEAQDTSPRQWEVIRALA
EEFFAGDGAREKVRTIFAVGDEKQSIYSFQGAVPAYFAEMRKFFARRAEEAQKNFEGIEL
NLSFRSTPDVLGAVDKVFDTPETYKGLSQDNVAPVHEAIRHNDPGRVEIWPLEEAVETLE
PDDWTQPIDAIGTGNPMLRLATRIAEQIKDWDERNIAGPGDVLVLVRKRGPFVEALNREL
KRLDVPAAGSDRLVLTDHIAVKDLVALGRFILLPEDDLSLACVLKSPLFGLLDDDLFEIA
HETPGVPRPGTLWHELLRKSENSEKWQLVRKQLEVWRDRADFVPPFEFYAKIMGTDGYRQ
KFRERLGTEVDDVLDEFLSLTLTYEKSGTPGMEGFLAWLAEAPTEIKRELNAAKGMVRIM
TVHGSKGLEAPYVILADGCNAPVSSLHAPVMVEKQRAGDTEAAPALVWLPNKAQRTEWHE
EALELLADEQKEEYRRLLYVALTRAKDRLVVCGWSPKRGPHDECWYTLTRNGLIEEAREQ
TDANGEVSAWIWTKGGIEKPEPVLPQSEKAESQQQAAMPDWISKNVSTPERIRRLKPSAA
FEEMEAKESIEQQDPKDALEAARQPEDWPLVRGRIVHRLLEFLPDLPEDQRMVSAERFLA
SSLPECFADKRDRLLDDVFNTLGNPEFAELFSANGRAEVPIQGMLTGEDGKPVEVFGLID
RLLVNDEEVIILDFKTNAYVPRSVHDVSETYVAQLAVYRKLLSELYPDKRIRALLLYTSG
PHLVEIPVELMKSFKF
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggatatcccagcaaaaaccctcgatagccaacaacgcgcagcgcatcctgaaaactca
gcatgggtgagtgcaaatgcaggctccggcaaaacattcgtgcttgcccgccgcgtggtc
cgcttgctgctgtccggtacagacccctcccgcatcctctgcctcaccttcaccaaggca
gcagcggcggagatggcaacccgcgtgttcgattccctcgccaagtggacacagctaagc
gatgcagagctggctgctgagattgaggatatcgaaggttgcccaacctcgcccaagcaa
ctggccaacgcccgccgtctcttcgccaaagcactggaaacaccgggtggcctgaaaatc
cagaccatccatgcgttctgtgaagcgctgctgcaccagttcccgctggaagcgaatgtt
gctggccacttttccgtgctggatgaccgcttggccgaagagctgctcaacgaagcccgc
gccagcattctgcaccgcgcagagattaagcctgagtccgatatcgggtcagctctgtcc
cagcttatcgagctattaccggattcaggcgtcgagaaagccctctcagagctgatcagc
cgccgcgatgcgttctaccgttgggttgctccttatggggacctggaaagcgccatttcc
gcgctatacgctgatttctccgtcataccggaggatgatatatctgactttgcatctgcg
ttgcgacggaaatgttctctcactgacgacgaagtaaaagcgtttgcagaagccttacgc
gtcggctccaagacagatcaggaccgcgccaatgctctggatcaggcaatcacgctcaaa
agcgacgaagcctggcgcattgcatggctgaagatcttcctcacaggcaccctcggccct
cgcaaatccctcgccaccaagaaggtgcaaaccgccttcccagaagttgtcgagcgtttg
ttcgctgagcaactgcgtgtgctggaagctttgcaacaccagaacgccgtcataacggta
tccggcaccaaagcgatcctcatcctctcagatgcggttttgcgctactacgagacggaa
aaactccgtcgcggttacctcgactttgaggacttggtggtgaaatctgcgcagctcctg
tcccgtgcagaagctgctcaatgggtgcagtacaagctggaccaaggcctcgaccacatc
ctcgtggatgaagcgcaggacaccagcccccgccagtgggaggtgatccgcgcactggca
gaagaattcttcgcgggtgatggcgcacgagagaaagtccgcaccatcttcgcggtaggc
gacgagaagcagtccatctactccttccagggcgccgtcccagcctatttcgccgaaatg
cgcaagttctttgcccgccgtgctgaagaagcacagaagaacttcgagggcatcgagctc
aacctctccttccgctccacaccggatgtgctgggcgcggtcgataaggtcttcgacacg
ccggaaacctacaaaggcctgtctcaggacaacgttgcgcccgtgcacgaagccatccgc
cacaacgatccgggccgcgtcgaaatctggccactggaagaagccgttgaaacgctggaa
ccggacgactggacccagccaatcgatgccatcggcaccggcaatcccatgctgcgcctc
gccacccgcattgcggagcagatcaaggattgggatgagcgcaacatcgctgggccggga
gatgttctcgtcctcgtccgcaagcgtggcccgtttgtggaagcactcaaccgcgaactc
aaacgcttggatgtgcctgccgctggctctgaccgtcttgtcctcacagaccacatcgcg
gtcaaagaccttgttgcgctgggccgctttatcctgctgccagaagatgatctgtctctt
gcctgcgttctcaaaagcccactgttcggcctgctggatgacgacctcttcgagatcgcc
catgaaacaccgggtgttccaaggccgggtaccctctggcatgagctgctgagaaaatca
gaaaacagcgagaagtggcaactcgtccgcaagcagctggaagtctggcgagaccgcgcc
gacttcgtgccgccgttcgagttctacgccaaaatcatgggcacagacggctaccgccag
aagttccgcgaacgcctcggcactgaagtcgatgacgtgcttgatgagttcctttcattg
acgctcacttatgagaagagtggtacaccgggcatggaaggcttccttgcatggctggcg
gaagcgccgaccgagatcaagcgagagctgaacgccgccaaaggcatggtccgcatcatg
acggtccacggctccaaaggtctggaagcgccctacgttatcctcgctgatggctgtaac
gccccagtctccagcctgcacgcgccggtgatggttgaaaagcagcgggcaggggatacg
gaagcagcacccgctctcgtctggctgcccaacaaggcacagcgcaccgaatggcatgaa
gaagcgctggaactgctggccgatgagcagaaagaagaataccgccgcttgctctatgtg
gcccttacccgcgcaaaagaccgcctcgtcgtctgcggttggtcgcctaagcgcggccct
catgatgaatgttggtacacactcactcgcaacggattgattgaggaagcgcgcgagcaa
acagacgccaatggtgaagtatccgcatggatctggaccaagggtggcattgaaaagcca
gaaccggtcctgccacagtccgaaaaggctgaaagccagcaacaggcagcaatgcccgac
tggatttccaaaaacgtcagcaccccggaacgtatccgccgcctgaagccatctgccgct
tttgaggagatggaagcaaaggaaagcatcgagcagcaagatccgaaagatgctctcgaa
gcggcgcgccaaccagaagactggcctctggtccgtggccgcatcgtccaccgcctgctg
gagtttctgcctgacctgccagaagaccagcgcatggtgtctgctgaaaggttcctcgcc
agttctctgccagagtgctttgcggacaaaagagaccgcctgctggatgatgtcttcaat
acgctgggcaacccagagtttgcagagctgttcagtgccaacggcagagctgaagttcca
attcagggcatgctcactggagaggacggcaaaccagtcgaagtcttcggcctgattgac
cgattgctggtcaatgacgaagaagtgatcattctcgacttcaagacgaatgcttatgtg
ccacgaagcgtgcacgatgtctccgaaacgtatgttgcgcagctagctgtttatagaaaa
ctgctttctgagctttatccggataagagaataagagcgctgctcctctatacgtcaggt
ccccatttggtagaaataccagtggaactgatgaaatcttttaaattctag
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