Pseudovibrio sp. FO-BEG1: PSE_0678
Help
Entry
PSE_0678 CDS
T01669
Name
(GenBank) FAD binding domain of DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psf03400
]
PSE_0678
Enzymes [BR:
psf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSE_0678
DNA repair and recombination proteins [BR:
psf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSE_0678
Prokaryotic type
PSE_0678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEV35190
UniProt:
G8PN35
LinkDB
All DBs
Position
702668..704083
Genome browser
AA seq
471 aa
AA seq
DB search
MSASIVIHWFRQDLRLSDNPALSAACDVGEVIPLYILNDKEYGARKLGGATKNWLHYSLK
ALNESLKGQLLIMRGDPAVIINSLIQETGAAGVFWNRCYEPWRVEHDAQLKTDLEENGIA
AKSFNGSLLWEPWQVGKRDGSPYKVFTPFYRKGCLQAQEPRKPLPVPDQLRIHSFSAEGA
LAIDELNLLEDRPWSAQVSSHWEHGEKAAQNRFYAFFEDGLSDYKDGRNFPALTHTSRLS
PHLHFGEISPNQIWWALGSHEETRDIDHFRSELGWREFSYSLLFNNPSLPKSNLNEKFDN
FPWLSDDQRLSAWQKGQTGIPIVDAGMRELWQTGYMHNRLRMIVGSFLVKNLLLDWRLGE
EWFWDCLVDADLANNSASWQWIAGCGADAAPYFRIFNPILQGEKFDAHGEYTRRFLPELK
DLPDKYLFRPWEAPKDILQGAGVTLGENYPLPIVNLKKSRDEALRAFEEIK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatccatcgtaatccattggttccgtcaggatcttcgcctgagcgacaatcct
gcgctctctgcggcttgcgatgtaggagaggttatccctctctatattctgaatgataaa
gagtacggtgctcgaaaactcggcggtgcgaccaaaaactggctgcactattctttaaaa
gctctcaatgaaagcttgaaagggcaactgttgataatgcgcggtgaccccgccgtgatt
atcaactcgctcattcaggagactggtgcagctggtgttttctggaaccgatgctatgag
ccatggcgtgtagagcatgatgctcagctgaaaactgaccttgaagaaaacggcatagca
gccaagagcttcaatggctcactcctctgggaaccctggcaagtgggtaaacgggatggc
agcccgtataaggtgttcactcccttctatcggaaaggctgtcttcaagctcaggaaccc
agaaagcctttgcctgttcctgatcaattgcgcattcattcttttagtgcagaaggggct
ctcgcaatagatgagctcaacttgcttgaggatcggccatggtcagctcaagtgagcagt
cactgggagcatggcgaaaaagctgcccaaaaccgtttctatgcattttttgaagatggg
ctctccgattacaaagatggccgaaacttcccagctctgacacatacttcccgcctgtcg
cctcatctgcactttggtgagatctctcccaaccaaatctggtgggcattaggctcacat
gaagaaacacgagatatcgaccatttccgcagtgaactgggctggcgtgagttctcatat
tctctgctattcaacaacccgagtcttccaaagagtaatctgaacgaaaagttcgacaac
tttccttggctctcagatgatcagcgcctttctgcatggcaaaaaggtcaaacaggcatt
ccgattgtcgatgcaggtatgcgagaactttggcaaaccgggtacatgcacaatcgcctg
cgcatgatcgtaggatcgttcctcgtcaaaaacttgctgctggactggcgattgggagag
gagtggttttgggactgtctggtcgatgctgatctcgccaacaacagcgccagttggcaa
tggatcgccggatgtggtgcagatgcagctccttactttcgcatcttcaatccaatcctg
cagggcgaaaagtttgatgctcatggcgaatatacacgccgtttcttgcctgaactaaag
gatctgccggataagtatctcttcaggccttgggaagcccctaaagacattctgcaaggt
gctggtgtcacgctgggagaaaactacccgcttccaatcgtgaatctcaagaaatctcga
gatgaagcgctgcgtgcctttgaggagataaaataa
DBGET
integrated database retrieval system
