Pseudovibrio sp. FO-BEG1: PSE_0695
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Entry
PSE_0695 CDS
T01669
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psf03016
]
PSE_0695
Enzymes [BR:
psf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PSE_0695
Transfer RNA biogenesis [BR:
psf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PSE_0695
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEV35207
UniProt:
G8PNT9
LinkDB
All DBs
Position
complement(719051..719671)
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AA seq
206 aa
AA seq
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MTIRYHKNDLPDLSNYSSADAVAVDTETLGLNPHRDRLCVVQLSSGDGSADVVQIERGQL
AAPNLQALFEDASKPKIFHFARFDVAILKEYLDISVSPVWCTKIASKLVRTYTDRHGLKD
ICRELIGVDLSKQQQSSDWAAEKLTDAQLAYAASDVLHLHKLKERLEFMLEREERTEIAQ
KCFDFLPTRAQLDLAGWPETDIFAHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcagatatcacaaaaacgatcttccggacctttccaactactcttctgctgat
gcagttgcggtggacactgaaactttaggtctgaacccacaccgtgatcggttgtgcgtt
gtacagctttcttccggtgatggttctgctgatgttgtgcagattgagcgcggccagctg
gctgcacctaacctgcaagcgctgtttgaagacgcaagcaagccaaagatttttcacttt
gcccgctttgatgttgccatattgaaagagtatctggacatctccgtttcgccggtctgg
tgcactaaaattgcgtccaagcttgtgcgcacctatacggatcgtcacggacttaaagat
atttgccgcgagttgattggtgttgacctttccaaacagcagcaaagctctgattgggca
gctgaaaaactgacagatgcacagcttgcctacgctgcatcagatgttcttcatcttcat
aagcttaaagagcgtcttgaatttatgcttgagcgcgaagagcgtaccgagattgcgcag
aagtgcttcgattttctgcctacacgtgcgcagcttgaccttgcaggatggcctgaaact
gacattttcgcacattcttaa
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