Pseudovibrio sp. FO-BEG1: PSE_1490
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Entry
PSE_1490 CDS
T01669
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin 1/GroEL protein 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSE_1490 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psf03019
]
PSE_1490 (groEL)
03110 Chaperones and folding catalysts [BR:
psf03110
]
PSE_1490 (groEL)
03029 Mitochondrial biogenesis [BR:
psf03029
]
PSE_1490 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psf04147
]
PSE_1490 (groEL)
Enzymes [BR:
psf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSE_1490 (groEL)
Messenger RNA biogenesis [BR:
psf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSE_1490 (groEL)
Chaperones and folding catalysts [BR:
psf03110
]
Heat shock proteins
HSP60 / Chaperonin
PSE_1490 (groEL)
Mitochondrial biogenesis [BR:
psf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSE_1490 (groEL)
Exosome [BR:
psf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSE_1490 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PSE_1490 (groEL)
Exosomal proteins of breast cancer cells
PSE_1490 (groEL)
Exosomal proteins of colorectal cancer cells
PSE_1490 (groEL)
Exosomal proteins of bladder cancer cells
PSE_1490 (groEL)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
AEV36002
LinkDB
All DBs
Position
complement(1577218..1578870)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKEVKFGSDAREKMLKGVDILANAVKVTLGPKGRNVVLDKAFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVKEGAKFVAAGMNPMDLKRGV
DMATAAAVADLTARSKTISSSDEVAQVGTISANGDTQIGADIAEAMQRVGNEGVITVEEA
KSLETELEVVEGMQFDRGYLSPYFVTNAEKMIADLEKPLILLHEKKLSNLQPMLPILESA
VQSSRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVTIDMLGTADKVNISKENTTIVDGAGDKADIEARVAQIKAQIEETSSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVEEGIVPGGGTALL
RAKAAVEKVSSENVDIEAGIKIVLRALEAPLRQIAENSGVEGSIVVGKIQDNIADETFGF
NAQSEEYVNMIEAGIIDPTKVVRTALQDAASVSGLLITTEAMVAELPKKDAGPAMPPMDG
GMGGMGGMGF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagaagtcaagttcggttctgacgctcgtgagaagatgcttaaaggcgtc
gacattcttgcaaacgctgtaaaagttaccctcggccctaaaggtcgtaacgttgttctg
gataaagcattcggcgcaccacgcatcaccaaagacggtgtttctgttgcgaaggaaatc
gaacttgaagataagttcgaaaacatgggcgcacagatggtgcgtgaagttgcttccaaa
accaacgacatcgctggtgacggtacaaccactgctactgttctggcacaggctatcgtt
aaagaaggtgctaagttcgttgctgctggcatgaacccaatggacctgaagcgcggcgtt
gacatggcaactgctgctgctgttgcagacctgactgcacgttccaagaccatctcttct
tctgacgaagttgcacaggttggcaccatctccgctaacggcgacactcagatcggtgca
gacattgctgaagcaatgcagcgcgttggcaacgaaggtgttatcaccgttgaagaagct
aagtcccttgagactgagcttgaagttgttgaaggtatgcagttcgaccgtggttacctt
tctccatacttcgtcaccaacgctgaaaagatgattgctgacctggaaaagccactcatt
ctcctgcacgagaagaagctttccaacctgcagccaatgcttccaatcctggaaagcgct
gttcagtcttcccgtccactgctgatcattgcagaagacgttgaaggtgaagcacttgca
actctcgtagtgaacaagctgcgcggtggcctgaagatcgctgcagttaaagctcctggc
ttcggtgaccgtcgtaaggcaatgctcgaagacatcgctatcctgactggtggtaccgtg
atctctgaagatctgggcatcaagctggaaaacgtaaccatcgacatgctcggcactgca
gacaaggtgaacatctccaaagagaacaccaccattgttgacggcgctggcgacaaagct
gacatcgaagcacgcgttgctcagatcaaagctcagatcgaagaaacctcttccgactac
gaccgtgaaaagctgcaggaacgtcttgctaagcttgctggtggtgttgcagttatccgc
gttggcggtgcaaccgaagtagaagttaaagagaaaaaagaccgcatcgacgacgctctg
aacgcgacccgcgctgctgttgaagaaggtatcgtaccaggtggtggtactgctctgctg
cgcgctaaagctgctgttgagaaagtatcttccgagaacgttgacattgaagctggtatc
aagatcgttctgcgcgctcttgaagctccactgcgccagatcgctgaaaactccggcgtt
gaaggttccatcgttgttggcaagatccaggacaacattgctgatgagaccttcggtttc
aacgctcagtctgaagaatacgtcaacatgatcgaagctggtatcatcgacccaactaag
gttgttcgtaccgctcttcaggacgcagcatccgtttccggcctgctgatcaccactgaa
gcaatggttgctgaacttcctaagaaagacgctggcccagcaatgcctccaatggacggc
ggcatgggcggcatgggtggcatgggcttctaa
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