KEGG   Pseudovibrio sp. FO-BEG1: PSE_1741
Entry
PSE_1741          CDS       T01669                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
psf  Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:psf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psf03400]
    PSE_1741
Enzymes [BR:psf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSE_1741
    5.6.2.6  RNA 3'-5' helicase
     PSE_1741
DNA repair and recombination proteins [BR:psf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PSE_1741
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AEV36253
UniProt: G8PUC8
LinkDB
Position
complement(1840980..1843508)
AA seq 842 aa
MADTSHLPSVFTNWFDSRGWAPRVHQLELFEKVTAGNSALLIAPTGGGKTLAGFLPSLVD
LHQRTKAEKRQPGAAASSGSGGLHTLYMSPLKALATDIHRNLEVPIEEMGLSIKLETRSG
DTPSHKKQRQKRIPPDILLTTPEQISLLLSDKNAERLFADLQYVILDELHELVTSKRGDL
LALALTRLRKLAPNLRCIGLSATIAHPDDLRAYLVEQPLSQQVHHAEIVQAKGGAKPHIS
ILETQERLPWSGHSCIYALPEIYEEIKAHNTTLVFVNTRSQAERLFQELWRINEETLPIA
LHHGSLDVGQRRKVEAHMAAGQLKAVVCTSSLDLGIDWGDIDLVINVGAPKGASRLAQRI
GRANHRMNEASKAILVPSNRFEVLECQAALEASEAGEQDTPPLRQGGLDVLAQHIMCVAC
AAPFEPEKLYEEVISSQSYRYLDYDLFVKAVEFVATGGYALKAYDRYAKLRPTKEGLFRV
SHPQFAQQYRLNSGTILDAATLKVRQVKPRGPNSKRPLGFGGKMLGEIEEWFIEQLAVGD
TFVFAGQVLKFEGLKESEAYVSRSSSQDPKIPSYQGGKFPLSTYLAEGVRHFASDPNTWS
SLPGQVREWLELQKDKSQLPDYERLLVETFPRNDKHYLVCYPFEGRLAHQTLGMLLTRRL
ERAGLHPLGFVATEYSLALWGLRDMGLAIKSGRLRLDELFEEDMLGDDLEAWLAESSLMK
RTFRNCAMISGLVERRHPGKEKTGRQITINTDLIYNVLHEHEPEHLLLQATWTDAATGLL
DISRLGHFLSRIDKRITHSALGRVSPLAVPVLLEIGKEPIFGSATEALLADAADDLILEA
QL
NT seq 2529 nt   +upstreamnt  +downstreamnt
ttggcagatacctctcaccttccttccgtcttcaccaactggtttgacagccgtggctgg
gcaccacgtgtgcaccagctggagttgtttgagaaagtgaccgctggcaactccgcgctt
ttgatcgcgcccaccgggggcggtaagactcttgcgggctttctgcccagtctggtggat
ctgcaccaacgcacgaaggctgagaagcgccaaccgggggcagctgcgtcctcaggctca
ggcggattgcacacgctttacatgtctcccctcaaagctttggcgacggatattcatcgg
aaccttgaagtgccgattgaggagatgggtctttccatcaaactggagacccgctctggc
gatacgccaagccacaagaagcagcggcagaagcgtattccgccggacattttgctgacc
acgccggaacagatctcactcctgctgtctgacaagaacgccgagcggctgtttgctgat
ctgcagtatgtcattctggatgagctgcatgagttggtgacgtccaagcgcggtgacttg
ttagctctggctttgacgcgtttgcgcaagctggcgccaaacctacgctgtatcgggctt
tccgctaccatcgcgcatccggatgatctgcgggcgtatctggtggagcaacccctgtcg
caacaggttcaccatgcggagattgtgcaggccaaaggtggagccaagccgcatatcagc
attttggaaacgcaggagcgtttgccgtggtctggtcattcctgcatttatgccctgccg
gagatctatgaggagatcaaagcccacaacaccacgctggtgtttgtgaacacgcgctct
caggctgagcggttatttcaggagctttggcgcatcaatgaggagacactgccgattgcc
ctgcaccacggctcgctggatgtgggccagcgccgcaaggtggaagcgcatatggcggca
ggtcagctgaaggcggttgtctgtacctcctcgctggatctgggcattgactggggtgat
atcgatctggtgatcaatgtgggggcgcccaagggggcaagccgtctggcacagcgcatt
ggccgtgccaatcaccgtatgaatgaggcgtccaaggcgatcctggtgccgtccaaccga
tttgaggtgctggagtgtcaggcagcgctggaagcttcagaggctggagagcaggatacc
cctccccttcgtcagggcgggctggatgttctggcccagcacatcatgtgcgttgcctgt
gcagctccctttgagcctgaaaagctctatgaggaagtgatcagcagccagtcctaccgc
tatctagactatgatctttttgtgaaggccgtggaatttgtggccactggtggttatgcg
ctgaaggcttatgacagatacgccaagctgcgcccgaccaaggaggggctgtttcgcgtt
tctcaccctcagtttgcccagcagtaccggctcaactccggcaccattttagatgcggcc
acgcttaaagtgcggcaggtgaagccacgtggccccaacagcaaacgccccttgggattt
ggcggcaagatgctgggtgagattgaagagtggttcattgagcagctggcggtgggtgat
acattcgtgtttgccggacaagtgctgaagtttgaaggccttaaagaaagtgaggcctat
gtgtctcgcagttcctcacaggatccgaagatccccagctatcaagggggcaaattccct
ctcagtacttatctagctgaaggcgttcgacattttgcctctgatcctaacacttggtca
tctttacccggtcaggttcgcgaatggttggagctacaaaaagataaatcacagttacca
gattatgaacgtctactggtagagacctttccgcggaacgataaacactatctggtgtgc
tatccgtttgaaggcagattggctcaccaaacgcttggtatgctgctgacacgccgcctt
gagcgcgctggcctgcaccccttggggtttgtggccacggagtactctctggccctgtgg
ggcctgcgggatatggggctggcgattaaaagtgggcgcctgcggctggatgagctgttt
gaagaagatatgcttggagatgaccttgaagcgtggcttgctgaaagtagtttgatgaaa
cgtacctttagaaattgtgccatgatctctggtcttgttgaaagacgccaccccggtaaa
gagaaaaccgggcggcagataactataaatacggatcttatttataacgtactgcatgaa
cacgagccggagcacctgcttttacaggcgacatggacagatgcagcaacaggacttttg
gatatctctcgtttaggtcactttctttctcgtatcgacaaaagaatcacgcatagtgct
ttgggtcgtgtttccccattggctgttccggttcttcttgagattgggaaagagcctatc
tttggaagtgcgacagaagcgctgctggcggacgcagcagatgatttgatactggaggcc
caattgtga

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