Pseudovibrio sp. FO-BEG1: PSE_2662
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Entry
PSE_2662 CDS
T01669
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psf01002
]
PSE_2662
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psf01011
]
PSE_2662
Peptidases and inhibitors [BR:
psf01002
]
Cysteine peptidases
Family C82
PSE_2662
Peptidoglycan biosynthesis and degradation proteins [BR:
psf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PSE_2662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AEV37170
UniProt:
G8PQ41
LinkDB
All DBs
Position
complement(2823725..2825602)
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AA seq
625 aa
AA seq
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MSHKSICATILAASLIGMISPSSATSNATSSERLIDPLNFNEDPAALPDLPAPEDLSPPV
IEPLVMPESEPQAPPLTGPAGQVAKPTGSELSELEQTIRDLIFSEADIQKAGFSPKQVDA
LAEAYALRKFRPVWFEDQSLTPLANHLVTEIRKAPAHGLDPQAYGVRQLASILAVMEASN
ATATLHEIAVVELQLTRAFATYGAHIAGGVVRPTKVLKNVFISPQVPKLNDMLTQMEETR
SLAQFFDGLEPEAPSYDILKDQLARYNAALTSDYPIYIEDGPSIRPGDTGGRVAQLEKRL
QAEGYAPYYSGYTGTSETEVPPTFYNDDMVELVKDFQKRHGLTVDGVVGKKTRAALNASL
EDRRNQILVNLERMRWDDPLPSGRYVKVNVAEQMVRVMEGTDVLYETRSVVGKPRNATPL
FSDTFEYAEINPTWGVPWSIATNEYLPKLRKNASALSGTGINVYKNGKRVDPTAINWSNV
SKRKFGYQLRQKAGRKNALGAVKYMFPNKHNIYLHDTPSKRLFNKDQRAFSHGCIRVQDP
FTFGEVLLSGSGHSRAKMEKLRARGKTVRLKLTETVPVHLRYYTAFAGVDGELQFREDIY
KQDKAILEALLTSQDAFKMKMASTY
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcacaagagtatctgtgccaccattctcgctgcaagtctgattggaatgatctcg
ccatcaagtgcgaccagtaatgcaacttcctccgagcgacttatagatccgctgaatttc
aacgaagatccggcggccctgcctgacctgccagcaccggaagacctgtccccgcctgta
attgagccgctggtgatgccagagagtgaaccgcaggcccctcctctgactggccctgcc
ggacaggtggccaagccaacgggctcagagctttctgagttggagcagaccatccgggat
ctgatcttttctgaagcagacatccagaaggctggtttcagccccaagcaggttgacgcc
ttggctgaggcgtatgccttacgtaagttccgtcctgtgtggtttgaggaccagtcttta
acgccgctggccaatcatctggtcactgagattcgcaaggcgccggcccatgggcttgat
ccgcaagcctatggtgttcgtcagctcgcctccattctggccgtcatggaagcgtccaac
gcgactgcaacccttcatgagattgcggttgtcgagttgcagttgacccgtgcctttgcc
acttatggcgctcacattgcaggcggtgttgtgcggccgaccaaggtgctgaagaacgtg
ttcatctcacctcaggtgccaaagctgaacgacatgctcacccagatggaagaaacccgc
tcattggcgcagttcttcgacgggctggagccggaagcaccttcctacgacattttgaag
gatcagctggcccgctataacgcggcgctgacttctgactatcccatttacattgaagat
ggcccaagcatccggcccggtgatacaggaggtcgtgtggctcagctggaaaagcggctg
caagctgaaggctatgcgccttactattccggttatacgggcacaagtgaaactgaggtg
ccaccaaccttttacaatgatgacatggttgagctggtcaaggacttccagaagcgccat
ggcctgacggtcgatggcgttgttggcaagaagacacgggccgcgctcaatgcttcctta
gaggatcgccgcaatcagattctcgtcaatctggagcgcatgcgctgggatgatccgctg
ccatcaggtcgctatgtgaaggtgaacgtggctgaacagatggtgcgggtgatggaaggc
acggatgtgctttatgaaacccgcagcgtggtgggcaagccgcgcaatgcgacaccgctg
ttttccgatacttttgagtacgctgagatcaacccgacctggggtgttccgtggtccatt
gccaccaatgagtatctgccgaagcttcgcaagaacgcatccgccctctccggcacaggc
atcaacgtttacaagaacggcaaacgggttgaccccacagcgatcaactggagcaatgtg
agcaagcgcaagtttgggtatcagctgcgccagaaggcaggccggaagaatgctctgggg
gcggtgaagtacatgttccccaacaagcacaacatctatctgcacgacacgccgtccaag
cgcctgttcaacaaagatcaacgtgccttcagccatggctgtattcgcgtgcaggatccc
ttcaccttcggcgaggtgctgctttccggctccggccacagccgtgcaaagatggaaaag
ctgcgtgcgcgtggcaaaactgttcgcctgaagctgacggagacggtgccagtgcatctg
cgctactacaccgcctttgccggtgttgatggggagctgcagttccgggaagacatctac
aaacaggacaaagctattttagaagcgcttttgacttcgcaagatgcattcaaaatgaag
atggcctccacctactga
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