Pseudovibrio sp. FO-BEG1: PSE_2872
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Entry
PSE_2872 CDS
T01669
Symbol
appF
Name
(GenBank) oligopeptide transport ATP-binding protein AppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSE_2872 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psf02000
]
PSE_2872 (appF)
Transporters [BR:
psf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PSE_2872 (appF)
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_16
AAA_22
DUF87
nSTAND3
AAA_18
AAA_29
Zeta_toxin
nSTAND1
AAA_30
RsgA_GTPase
AAA_33
ATP-synt_ab
AAA_23
PRK
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEV37380
UniProt:
G8PSR7
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All DBs
Position
3071921..3072961
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AA seq
346 aa
AA seq
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MTNFHIPDDALISVEKLQMHFPIKKGFLGRELGAVKAVDDVSFYIRKGETLGIVGESGSG
KSTTARALLRAYEPTGGTIRFKDPEGNWHDLTHKSEAEMRQLRQYMQMIFQDPYASLNPR
MTLLQLVSEPLVNNGITNKSELEDRVADLLIKVGLRPENMTRYPHAFSGGQRQRIGIARA
LALNPTFIAADESVSALDVSIAAQTINLLQDLQEQMGLTYLFITHDLSMVEHISDRIGVM
YAGRLVEVADTVSFFEQPLHPYSEALLSAIPIPDPKRARAKKRGLVKGEVADPANLPVGC
AFASRCPHASELCHMSNPELTETAEGRFVRCHHSADLKLQGANYDQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgactaattttcatatacctgatgatgctctgatcagcgttgaaaagctgcagatgcat
tttcccatcaaaaagggttttctgggccgtgagttaggcgctgttaaagccgttgatgat
gtgtcgttttacatcagaaaaggcgagaccctgggcatcgtgggcgaaagtggctccggc
aaatccaccacggcacgcgccttgctgcgagcctatgagccaaccggcggcacaatccgc
ttcaaggacccagaaggcaattggcatgacctgacccacaagagcgaagcagaaatgcgc
cagctccgtcagtacatgcagatgatctttcaggatccttatgcctcactcaacccgcgc
atgacgctgctgcagctggtcagcgagccgttggtcaacaacggcatcaccaataaaagt
gagctggaagatcgcgttgccgacttgctcatcaaagtgggtttgcgtccggaaaacatg
acccgctacccgcacgccttcagtggcggtcagcgacagcgtatcggcattgcccgcgct
ttggctctgaacccgacctttatcgcagccgatgagtcagtgtccgcgctggatgtatcc
atcgccgcgcaaaccatcaatctgctgcaggatttgcaggagcagatggggttgacctat
ctcttcatcacccatgatctgagtatggtggagcacatcagtgatcgcatcggcgtcatg
tacgcaggccgactggtggaagtggcagatacggtcagcttctttgaacagccgctgcat
ccatactctgaagcgctgctgtctgcgatcccgatccctgatccaaaacgcgcccgcgcc
aaaaagcgtggcctcgtcaaaggggaggtggccgatccggcgaacctgccagtgggctgc
gcatttgcaagccggtgcccgcacgcatccgagctctgccacatgtccaatccggaattg
accgaaacagcagaaggccggttcgtacgctgccaccattctgctgacctgaagctacaa
ggggccaactatgaccaataa
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