Pseudovibrio sp. FO-BEG1: PSE_3445
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Entry
PSE_3445 CDS
T01669
Name
(GenBank) Histone-like bacterial DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psf03032
]
PSE_3445
03036 Chromosome and associated proteins [BR:
psf03036
]
PSE_3445
03400 DNA repair and recombination proteins [BR:
psf03400
]
PSE_3445
DNA replication proteins [BR:
psf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSE_3445
Chromosome and associated proteins [BR:
psf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PSE_3445
DNA repair and recombination proteins [BR:
psf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PSE_3445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
CABIT
HU-DNA_bdg
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AEV37951
UniProt:
G8PJT7
LinkDB
All DBs
Position
complement(3747059..3747334)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNDLIGAVAEKTGLTKAQAGEAVEASFEAITETLKSGDEVRIIGFGNFSVSARAATEG
RNPRTGETIQIPASKTPKFKAGKGLKDAVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgatctgatcggggccgttgcagaaaaaactggcttgaccaaagcacag
gcaggcgaagcagtagaagcatctttcgaggcaatcactgaaaccctgaagagcggcgat
gaagttcggatcatcggatttggcaacttttccgtttccgctcgtgcggcaactgaaggc
cgtaatccacgcacaggcgaaaccattcagattccggcttccaagacgccgaaatttaaa
gctggtaaaggcctgaaggacgcggtcaacgcctaa
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