Pseudovibrio sp. FO-BEG1: PSE_3588
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Entry
PSE_3588 CDS
T01669
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf00260
Glycine, serine and threonine metabolism
psf00460
Cyanoamino acid metabolism
psf00630
Glyoxylate and dicarboxylate metabolism
psf00670
One carbon pool by folate
psf00680
Methane metabolism
psf01100
Metabolic pathways
psf01110
Biosynthesis of secondary metabolites
psf01120
Microbial metabolism in diverse environments
psf01200
Carbon metabolism
psf01230
Biosynthesis of amino acids
psf01240
Biosynthesis of cofactors
psf04981
Folate transport and metabolism
Module
psf_M00140
C1-unit interconversion, prokaryotes
psf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSE_3588
09102 Energy metabolism
00680 Methane metabolism
PSE_3588
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSE_3588
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PSE_3588
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSE_3588
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSE_3588
Enzymes [BR:
psf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PSE_3588
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
AEV38092
UniProt:
G8PLL1
LinkDB
All DBs
Position
complement(3900460..3901773)
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AA seq
437 aa
AA seq
DB search
MSVSDSPITTPLYPEFFTGSLASGDPELLEAINKELSRQQNEIELIASENIVSRAVLEAQ
GSVLTNKYAEGYPGRRYYGGCEYVDIVEQLAIDRVKTLFGCEFANVQANSGSQANQSVLL
ALAKPGDTLLGMSLDAGGHLTHGARPNLSGKWFNAVQYGLNTDTGRINMDEVRELAKEHQ
PKIIIAGGSAYSREIDFAAFRAIADEVGAYLWVDMAHFAGLVAGGQHPSPFPHAHVATST
THKTLRGPRGGLVVTNDADIAKKINSAIFPGLQGGPLMHVIAGKAVAFGEALRPEFKTYA
KDVVENAQVLAETLVEGGLDIVSGGTDTHLMLVDLRPMNLTGKNAEISLGRANITCNKNG
VPLDPQKPTITSGIRLGTPAGTSRGFGKEEFREIGKLITEVLEGLRKTNSVDGNEAVEAQ
VKEKVLALTARFPIYKN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtatcggatagtccaattacgacgccgctctacccagagttctttacaggtagc
ctggcttctggtgacccagagcttctcgaggcaatcaataaagagctttctcgtcagcag
aacgagattgaactcatcgcttcggaaaatatcgtgtcccgcgctgtgctggaagcacag
ggttccgttctgaccaacaaatacgctgaaggttaccctggccgccgttactacggtggt
tgtgagtatgtcgacattgttgagcagcttgcgatcgatcgtgtgaagacactgttcggc
tgtgagtttgcaaacgtgcaggcgaactccggttctcaggctaaccagtctgttcttctt
gcgctggctaaaccaggcgacactctgctcggcatgagccttgatgcgggtggtcacctg
acacacggtgcacgtcctaacctttccggtaagtggttcaacgctgttcagtacggcctg
aacaccgacactggccgcatcaacatggacgaagtgcgcgagcttgcaaaagaacatcag
cctaagatcatcatcgctggcggttctgcatactcccgtgagatcgactttgctgcattc
cgcgcaatcgctgacgaagtgggcgcgtacctgtgggtcgacatggcgcactttgcaggt
ctggttgcgggtggtcagcacccaagcccgttcccgcatgcgcatgttgcaacatccacc
acgcacaagacccttcgtggtcctcgcggtggtctggttgtgaccaacgacgctgacatt
gcgaagaaaatcaactccgcgatcttcccaggtctgcagggtggtcctctgatgcacgtg
attgctggtaaggctgttgccttcggtgaagcgctgcgtcctgagttcaaaacctacgca
aaagacgttgttgagaacgcacaggttctggctgagacccttgttgaaggtggtctggat
atcgtttctggcggtaccgacacacacctgatgctggttgacctgcgcccaatgaatctg
accggtaagaatgcagagatttctctgggccgtgcgaacatcacctgtaacaagaacggt
gttccgcttgatcctcagaagcctaccatcacttccggtatccgccttggtacgcctgct
ggtacttcccgcggcttcggcaaggaagaattccgtgaaatcggtaagctgattaccgag
gttctggaaggtctgcgtaagacaaattccgttgacggcaacgaagctgtggaagcacag
gtcaaagagaaggtactggcccttactgcccggttcccaatctacaaaaactaa
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