Pseudovibrio sp. FO-BEG1: PSE_3590
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Entry
PSE_3590 CDS
T01669
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psf01002
]
PSE_3590
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psf01011
]
PSE_3590
Peptidases and inhibitors [BR:
psf01002
]
Cysteine peptidases
Family C82
PSE_3590
Peptidoglycan biosynthesis and degradation proteins [BR:
psf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PSE_3590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEV38094
UniProt:
G8PLL3
LinkDB
All DBs
Position
complement(3902306..3903652)
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AA seq
448 aa
AA seq
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MLAPLLNRSKLALALVVSTGLSAGMMSAQAQVKVPGLLSYSGNIQQAVTEPAPVVTEQPI
VGQGTEWEDTFDEGVSSLEQIDFVAPIISKQTTQYMIDAILDYERIALNGGWPEVSTKKV
LRIGMRAPAIASLRQRLIVSGDMAQHAGVSEVFDSYVDSAVRRFQLRHGLTPDGVVGRAT
VIAMNVPVEVRLQQLRTNLERVSALADNVSDTYVNVNIPAARIEVVENGRVRSRHTAVVG
KQDRQSPILSSAIYEVNFNPYWTVPVSIIRKDLIPKMQKDPQYLAKNNIHIFDWYGKEKQ
WQEIDWNTDEATKYRFTQEPGEGNSMGSIRINFNNTHQVYLHDTPEQSLFGEGYRFHSSG
CVRVQNVRELVTWLLGSTTPEWTRSRVDATINSGERLDVKMKSRIPLHLSYVTAWALSDG
MVHFRDDIYDKDGLYSASVDPLAQASAQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttggcacctcttttaaaccgcagcaaacttgctcttgctctcgttgtgagtacgggt
ctttctgcaggtatgatgtccgcacaggcgcaggttaaggttcctgggttgctttcctat
agcggaaacatccagcaagctgtgaccgagccagctccggtcgtcactgagcagccgatt
gttggtcaaggcacagaatgggaagacacctttgatgagggtgtttcatctctggagcag
atcgactttgtggcgccgattatctccaagcagaccacccagtacatgattgacgcgatt
ctcgattatgagcgcatcgccctcaatggtggctggcctgaagtttctaccaaaaaggtt
ctgcgcatcggtatgcgcgcaccggccattgcttccctgcgacagcgcctgattgtttct
ggcgacatggcgcagcatgctggtgtttctgaagtttttgacagctacgttgattcagcc
gtgcgtcgtttccagctgcgccatggtctgacaccggatggtgttgtgggccgcgcgact
gtgattgccatgaatgtgcctgttgaggtgcgtttgcagcagctgcgcaccaatctggag
cgcgtttccgctctggctgataacgtgagtgatacctatgtgaacgtgaatattccggca
gctcgtattgaggttgttgagaatggccgcgttcgttcccgccacactgctgttgttggc
aagcaggatcgccagtctccaatcttgagctctgcgatctacgaggtgaacttcaacccg
tactggactgttcctgtcagcattatccggaaagaccttattccgaaaatgcagaaggat
ccgcagtatctggcgaagaacaatatccatatcttcgactggtatggaaaagagaagcag
tggcaggagatcgactggaacacggatgaagcgaccaagtatcgctttacgcaggagccg
ggcgaaggcaactccatgggcagcatccgtatcaacttcaacaacacccatcaggtttac
ctgcatgacacgccagagcagtctctgtttggcgaaggctatcgcttccattcttccggc
tgtgtgcgcgtacagaacgtgcgtgagctggtgacatggttgctgggctccacaacgcct
gagtggacccgttcccgcgtggatgcgaccatcaactccggtgaacgtctggatgtgaag
atgaagagccgcattccgctgcatctgtcctatgtgaccgcatgggcgctcagcgatggc
atggtccacttccgtgatgacatctacgacaaggatggtctgtattcagcaagtgttgat
ccgctggcgcaggcctctgctcagtaa
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