Pseudovibrio sp. FO-BEG1: PSE_3602
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Entry
PSE_3602 CDS
T01669
Name
(GenBank) Uracil DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSE_3602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psf03400
]
PSE_3602
Enzymes [BR:
psf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSE_3602
DNA repair and recombination proteins [BR:
psf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSE_3602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AvrRpt-cleavage
Motif
Other DBs
NCBI-ProteinID:
AEV38106
UniProt:
G8PLM5
LinkDB
All DBs
Position
complement(3914939..3915514)
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AA seq
191 aa
AA seq
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MRELHPDWHNAPVLDFGPVDASLIVVGLAPGHKGGNRTGIPFFGDFSGEMLNGALTASGF
ASYKDVAAPELGIEPLDVRITNVVKCMPPKNAPKPAEIRSCRPFFLDSMLVSDQTRAVVA
VGRTAHEELLKAFELKLKDYPFGHNRETQLTPFLRMFSSFHCSQYNVNTRRITAEQFTAV
FMRVREYLNSL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagcttcatccggattggcacaatgcgcctgtgctggactttggtcctgttgac
gcctctctcattgttgtggggctggctccgggacataaaggcggcaaccgcaccggtatt
ccgttctttggtgatttttctggcgaaatgctcaatggcgctctgacggcgagtgggttt
gcatcttacaaagatgtggcagctccagagcttgggattgaaccgctggatgtgcggatc
accaatgtggtgaagtgtatgccgccaaagaatgcgccaaaaccagcggaaatcaggagc
tgtcgaccgttctttctggattccatgctggtgagtgatcagacgcgggctgttgtggct
gtggggcggacggcgcatgaggagctgttgaaggcttttgagttgaagctgaaggactat
ccgtttgggcataatcgtgaaactcagctcacgccttttctcagaatgttttccagcttc
cattgttctcagtacaacgtgaatacgcggcggatcacagccgagcagtttacggctgtg
tttatgcgcgtgcgcgagtacttgaattctctttag
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