Pseudovibrio sp. FO-BEG1: PSE_3610
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Entry
PSE_3610 CDS
T01669
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psf03019
]
PSE_3610 (rnc)
03009 Ribosome biogenesis [BR:
psf03009
]
PSE_3610 (rnc)
03036 Chromosome and associated proteins [BR:
psf03036
]
PSE_3610 (rnc)
Enzymes [BR:
psf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PSE_3610 (rnc)
Messenger RNA biogenesis [BR:
psf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSE_3610 (rnc)
Ribosome biogenesis [BR:
psf03009
]
Eukaryotic type
90S particles
RNase
PSE_3610 (rnc)
Prokaryotic type
rRNA processing factors
PSE_3610 (rnc)
Chromosome and associated proteins [BR:
psf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PSE_3610 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AEV38114
UniProt:
G8PLN3
LinkDB
All DBs
Position
3922468..3923175
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AA seq
235 aa
AA seq
DB search
MSRRKRPVSDAALEERIGYKFTNKELLVRALTHASALPVAKASLQSYQRLEFLGDRVLGL
AIATMLEENFPKADEGELARRLNQLVKRETCAEVSKVIGIGQHMRVGEAEAHTGGRTKTA
ILADMCESLIAAIYLDSGFDEAENFIKRYFAERMVSYTGPLRDAKTTLQEWAQSKGRPTP
QYETISRSGPDHAPIFKIRVNVEGVDPGEAVGSSKRIAEQSAAENILRREGVWSE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagaaaaagaccggtatctgacgcagcgctggaagagcgcattggctacaag
ttcacgaacaaggaactccttgttcgtgcgctgactcacgccagtgcccttccggttgcc
aaggcttctttgcaaagctaccagcgccttgagtttcttggcgaccgcgtgcttggcctt
gcgattgcgacaatgctggaagaaaatttccctaaagcagatgaaggggaacttgctcgt
cgcctgaaccagcttgtgaagcgcgaaacatgtgctgaggtctcaaaggtcattggcatt
ggccagcacatgcgcgtgggcgaagctgaggcgcacactggcggcagaaccaaaacggca
attcttgcagacatgtgcgagagcctgattgcagcaatttaccttgatagcggatttgac
gaagcagagaacttcatcaagcgctattttgctgaaagaatggtatcttacacaggcccg
ttgcgagacgccaaaacaacgcttcaggagtgggcgcagtccaaaggacgccctaccccg
caatacgaaacaatctctcgcagtggtcccgaccacgccccgatcttcaagatccgcgtc
aacgtggaaggtgtggacccgggcgaagcagtcggaagctcaaagcgcatcgctgaacag
tccgctgccgagaacatcctgcgccgcgaaggcgtatggagcgaatag
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