Pseudovibrio sp. FO-BEG1: PSE_4274
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Entry
PSE_4274 CDS
T01669
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf00470
D-Amino acid metabolism
psf00550
Peptidoglycan biosynthesis
psf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSE_4274 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSE_4274 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psf01011
]
PSE_4274 (murD)
Enzymes [BR:
psf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PSE_4274 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psf01011
]
Precursor biosynthesis
Amino acid ligase
PSE_4274 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
Motif
Other DBs
NCBI-ProteinID:
AEV38778
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Position
complement(4627511..4628911)
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AA seq
466 aa
AA seq
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MIPIRHLAGKEVALFGLGGSGLVTARALEAGGARVDVWDDNEASVAAAEEQGLAAIDLRD
VDMTRYAALVVAPGVPLTHPTPHWSVVRAKEAGIPVIGDVELFVNEREAVCPEAPFVAIT
GTNGKSTTTALISHVLKECGMDVQMGGNIGRPVLDLEGFSEDRVYVVEVSSYQIDLAPSL
APDIGVMMNLSPDHLDRHGNMENYASIKERLVKAARLAVVGVDDEFSAAIAQRRAESGEP
IELISCHEPVEFGVYAADGKVIEVFDEEQVVAADLSSSNTLRGSHNGQNASAAVAVCAAL
GLELDEIAGALATFPGLAHRLKLVAEAGKVLFVNDSKATNAEAAAHALAAFDRIYWIAGG
RPKAGGISSLKAYFPKIVKAYLIGEAAEEFEQELSGSVEAHKFGSLDMAVEAAARDAARD
KSKEAVVLLSPACASFDQFKSFEVRGDAFESAAVAAAQMLNGEGAR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatccctatccgtcatcttgcaggtaaagaagttgcgttgtttgggctcggtggttcc
gggctcgtgactgcgcgcgcgcttgaggctggtggggctcgtgttgatgtctgggacgat
aacgaagcgagtgtcgccgctgctgaagagcaggggcttgctgcgattgatctgcgcgat
gtggacatgacccgttatgcagcgctggtcgttgcgccgggtgtgccgctgactcatccg
acaccgcactggagtgtagtgcgggctaaggaagctggcattccggtgattggggatgtg
gagctgttcgtaaatgagcgcgaggcggtttgtccggaagcgccgtttgttgcaatcact
ggcaccaacggaaaatccacgaccacggcgctgatctcgcatgtccttaaagaatgcggc
atggatgttcagatgggcggcaatattggtcgccctgtgctggaccttgaaggtttttct
gaagatcgcgtctatgtggttgaggtctcctcctaccagatcgatcttgcgccaagcctt
gcgcccgatatcggggtgatgatgaacctgtcgccagatcatctggaccggcatgggaac
atggagaattacgcttccatcaaggaacgtcttgtgaaggcggcgcgtctggctgttgtg
ggcgtggatgatgagtttagtgcggccattgcgcagcgccgggcggaaagtggtgagccg
attgagttgatctcctgtcacgaaccggttgagtttggtgtttatgccgcagatggcaag
gtcattgaagtttttgatgaagagcaggtggttgctgctgacctgtcttcctccaacact
ttgcgtggctctcacaatggacagaacgcatcggcagcggttgctgtttgtgcagcgctt
gggctggagctggatgagattgccggtgctttggcaacgttcccgggtcttgcgcaccgg
ctaaagctggtggctgaagcgggcaaggttctgtttgtgaacgacagcaaggcaaccaat
gctgaagcggcggcgcatgcgctggctgcgtttgatcggatttattggattgcgggtggc
cgtccaaaggcgggcggtatttcatccctgaaggcttacttcccgaagattgttaaagcg
tacctaatcggtgaagcggcggaagagtttgagcaggaactaagcggctcagttgaggca
cacaagttcggcagtctggatatggctgttgaagcggcagcgcgtgatgcggcgcgtgac
aagagcaaagaggcagtggttctgctgtctccggcttgtgcgtcctttgaccagttcaag
agcttcgaagttcgcggggatgcatttgagagcgcggctgttgctgctgcccaaatgctg
aatggtgagggggcacgctga
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