Pseudovibrio sp. FO-BEG1: PSE_4333
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Entry
PSE_4333 CDS
T01669
Name
(GenBank) exonuclease, dsDNA, ATP-dependent
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psf03400
]
PSE_4333
DNA repair and recombination proteins [BR:
psf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSE_4333
Archaeal homologous recombinant proteins
PSE_4333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND3
AAA_22
Hda_lid
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEV38835
UniProt:
G8PUX2
LinkDB
All DBs
Position
complement(4693766..4697500)
Genome browser
AA seq
1244 aa
AA seq
DB search
MRGENLASLAAPFEIDLEQEPLDGAGLFAITGETGAGKSTLLDALCLALFGQCPRLSAVG
SSDSVPDVAGADLKETNPRTVLTRGAASGFAEADFIGADGTGYRARWTVRRARNKASGRL
QNVERSLVRIEDNAAVESGIKQVDAAVEERLGLTYDQFKRTVLLAQGDFDAFLKANDNER
AALLEKVTGTQRYRDISKQIFQRFSEAKDAVGKLEEKSDVAGLLEDEDRTALVGEQGELE
KQSASVQSDMDAIAKSLGHLQKLDEAKTKLASAHDEFVTLKARHENAQAKRDLKAQFERI
KSLEPVNQRVVDAERDVAGTRATAEKSLVMLEAACTDLAAKDEQAKQADALFNELEAELT
KLTPEWSAAEQLDTKLGELETEGKQLRERSDAANLDAKQAEDALAAHTKSLEEQKALQAT
VKEQMARLSATKVLKERRDSLFADLEEYDRVQIALSKDAERLVEMRKRENELSEIQSKLS
AELAQFASDLDGCESDVASKKGEISALGANDARKSMEQLSAFRQRAEKLQETSRNFVKAK
RNKQAESATWQKLVNQMEGLQEAKEKATRELTFRDEALEKARGLSTLAEAAQGDQVKLLR
AGLVEDAPCPVCGSDDHPVDTQEGRAALDALFGDVFLQRKEAEEARTAAQRTLSDIEREL
AACEASKKNAFEQAERFEAETTALEADAQQQWSLLEAPFDLSFALDALLDAPELLDAVLA
QVTSKADALRAVLAQDDALRKELEQLEVKLRELRDAHKKAAGDQAGKAEEVSSIKVELSG
VEGRHNENSEARLRLEQRLSETLLAGGMVFGSLGDELPALKASLQDRISTWEQLEQQEGT
TSAALQSLEQKTSGLSERHGGLTKTAADLQGQLEKLRALHQERFAERKLLLGGMATGAHR
AAFTEQHSNAKERIKNASNAHSNAKAEFGRAEAGLAAAKDAEAKAGAALTDCAERLNAEL
AGLGLTKDAYDGLRERSSHELEALLAELKALDDAYVAAQTAVSTWEKELAAVQAQPLPDK
SQPELSSQLEATKQALSELQVKRGVLSEKLRVDAEAREKAQQIMGLLLEAKETAKTWGAI
SEAIGSADGSKFQKVAQGVTLDLLVELANKQLHQLKPRYQLKRADFGLGLFVIDRDMGDT
PRSTRSLSGGERFLISLSLALALSGLEGRQSFVDTLFIDEGFGSLDAESLDLAIDALEML
QGQGRKVGVISHVEALKDRIPVQVQVVRQGAGRSRVAVNAPADW
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtggcgaaaaccttgccagtctggcagctccgtttgagattgaccttgaacaggag
ccgctggacggggctggtttattcgcgattaccggagaaactggagcgggcaaatccaca
ctgctggatgccttgtgccttgccctgtttgggcagtgcccgcgtttgagcgctgtaggc
agcagtgacagtgtgccggatgttgccggtgcagacctgaaagagacaaacccgcgaacc
gtgctgacccgtggtgctgcctctggctttgccgaggcggactttattggcgcagatgga
acgggataccgcgcgcgctggacagtgcgccgggcgcgcaacaaagcatctggccgtttg
cagaatgtggagcggtcgctggttcgcattgaagacaatgctgcggttgaaagcggcatc
aagcaggtggatgcagctgttgaggaacggcttgggctgacctacgaccagttcaaacgc
acagttttgttggcgcagggcgattttgatgctttcctgaaagccaatgacaatgagcga
gctgcactgcttgagaaggtgaccggcacccagcgctacagagacatttccaagcagatc
tttcagcggttttctgaggccaaagatgctgtcggtaagctggaagaaaagtctgatgtg
gctggtcttctggaagatgaagaccgcaccgcgcttgttggtgagcagggagagctggaa
aagcagtctgcctctgttcaatcggatatggatgccattgccaagtctttggggcatttg
caaaagctggatgaagccaagaccaagcttgcctccgcccatgatgagtttgttaccctg
aaagcgcgccatgaaaatgcgcaggccaagcgagacttgaaggcgcagtttgagcgcatc
aagtctctggagcctgtgaaccagcgcgtggtggatgcagagcgcgatgttgctggcacg
cgtgcaactgctgaaaaaagcctggtgatgctggaagctgcgtgtacggatctggctgcc
aaggatgagcaggccaagcaggctgatgcgctgttcaatgagctggaagctgagctgacc
aagctgacaccggagtggagtgcagcggaacagctggacaccaagctgggtgagctggaa
acggaaggcaaacagctgcgcgaacgttctgatgcggccaatttggatgccaagcaggcg
gaagatgcgctggcggcgcacaccaaatctcttgaagagcagaaagccttgcaggccact
gtgaaagaacagatggcacggttgagcgcgaccaaagttctgaaggagcgccgggatagc
ctgtttgccgatctggaagagtatgaccgggttcagattgcgctttccaaggatgctgaa
cgccttgttgagatgcgcaagcgtgagaacgagctttctgagatccagagtaagctttcc
gctgagctggcgcagtttgcatctgaccttgacggctgtgagagcgatgttgcctccaag
aaaggcgagatttccgctcttggggccaatgatgcccgcaagagcatggagcagctttct
gctttccgccagcgggctgagaagcttcaggagacctctcgcaacttcgtaaaggccaag
cggaacaagcaggctgaaagtgcgacctggcagaagctggtgaaccagatggaaggcctg
caggaagccaaggagaaagcgacccgggagctgacgtttcgcgacgaagccctcgaaaaa
gcgcgtgggctctccacccttgctgaagcggcgcaaggggatcaggtaaagctgctgcgc
gccggattggttgaagatgcaccttgcccggtttgtggctctgacgatcaccccgtagat
acacaggagggccgggctgcgctggatgcgctgttcggcgacgtgtttctacagcgcaag
gaagcggaagaagctcgcacagctgcgcagcgaaccttaagcgatatagagcgagagctt
gctgcctgtgaagcttcgaagaagaacgcttttgagcaggcagaacggtttgaagcagag
acgactgcacttgaggcagacgctcagcagcaatggagtttgcttgaggctccgttcgat
ctgtcgtttgcgctggatgcattgttagatgcgccagagttgctggatgcggtgctggcg
caggtgacatccaaagcagatgctctgcgtgcagtactggctcaggacgacgcattgcgc
aaagagctggagcagttggaagtcaagcttcgtgaactgcgtgatgcacacaagaaagcg
gcgggtgatcaggctggaaaagctgaagaggtttcttccatcaaggtggagctttccggt
gttgaggggcgtcacaacgagaactctgaggcacggttgcggctggagcagcggcttagc
gaaacgctgctggctggtggcatggtattcgggtcccttggtgatgagttaccggcgctg
aaggcgagcttgcaggaccgcatcagcacatgggaacaacttgagcagcaggaggggaca
acttctgccgcgctgcaatcactggaacagaagacgagcggtttgagtgagcggcatggt
ggtctcactaagactgccgctgacttgcaagggcagcttgagaaacttcgggcgctgcat
caggagcggtttgcggagcgcaaattgctgctgggaggcatggcgaccggggcgcatcgg
gctgcattcactgaacaacatagcaacgcaaaagaacgcataaaaaacgcaagtaacgca
catagcaacgcaaaggccgagtttggccgtgcggaggctggattggctgctgcgaaggat
gctgaggcgaaggcaggtgccgcgctaaccgattgtgcggaaaggttaaatgctgagctt
gcggggctggggctgacgaaggacgcctatgatggtttgcgggagaggagctctcacgag
ttggaggccttgcttgctgagctgaaggcgctggatgacgcttacgttgcagcgcaaact
gctgtttccacttgggaaaaggagctggcagcggttcaggcgcagcccttgccggataag
tcgcagccggagttatcctctcagctggaggccaccaagcaagcgctgtctgagctgcaa
gtgaagcgcggcgttctttcagaaaagctgcgcgtggatgctgaggcgcgggaaaaagcc
caacaaatcatgggcttgctgctggaggcgaaagagaccgccaagacctggggcgcgatt
tccgaggcgattggctctgcggatggctccaagttccagaaggtggcgcagggtgttact
ctcgatttgctggtggagcttgccaacaaacagctgcatcagctcaaaccacggtaccag
ctgaaacgcgctgattttggtctcggcctcttcgtcatcgaccgcgatatgggcgatact
ccacgctctactcgctcgctaagtggcggagaacgcttccttatttcgcttagcctcgct
cttgctctctccggtttagaggggcgtcagtcgttcgttgacacgcttttcatcgacgaa
ggcttcggctcactggacgcagaaagcctcgatctggccattgatgcgctggagatgttg
caggggcaggggagaaaagttggcgtcattagccacgtggaagcactgaaggatcgaatt
ccggttcaggttcaggtggttaggcaaggtgccggacgcagccgcgtggcggtgaatgcg
ccagcagactggtga
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