KEGG   Pseudovibrio sp. FO-BEG1: PSE_4390
Entry
PSE_4390          CDS       T01669                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
psf  Pseudovibrio sp. FO-BEG1
Pathway
psf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PSE_4390 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psf03400]
    PSE_4390 (uvrB)
DNA repair and recombination proteins [BR:psf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PSE_4390 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PSE_4390 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD UB2H AAA_30 AAA_22 RIMB1_N DUF87 Kinesin FMN_bind Microtub_bd LIN13_N
Other DBs
NCBI-ProteinID: AEV38892
LinkDB
Position
complement(4753564..4756404)
AA seq 946 aa
MTKRPTKTSSSSSLPEAEGSSSGFGEAPQPALSGSPLSGSVSDWADQLAEEDLSGLKAKK
EAEQPAEEKPAPKKTTAKKPAAKKPASKAKKAPAKSARGTSMGATSDPRERAKGGLNPIA
GLDISLEDAEKLLDTHVKETKKKRKKAKEEAITGATATVQALARLIEQGRSDETGEDAWV
PHRPERPQKSEGGVAFSLESEFEPKGDQPKAIADLKAGLADGDKTQVLLGVTGSGKTFTM
AQLISQTQRPALILAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVARTDTFI
EKESSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTAMTFKLEVGEKIEQ
RQLLADLVALHYKRNDAAFQRGTFRVRGDTIEVFPAHYEDRAWRISLWGDEIESITEFDP
LTGKKSGELQLVKIYANSHYVTPKPTLNQAIKSIKKELKGRLDELNDHGRLLEAQRLDQR
CTFDLEMMEATGACAGIENYSRYLTGRAPGEPPPTLFEYLPDNALVFIDESHVTVPQIGA
MYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTVAVSATPGGWEMDESGGVFA
EQVIRPTGLTDPDIEIRPAKTQVDDLLGEVREKAANGFRTLVTTLTKRMAEDLTEYLHEN
GVRVRYMHSDIDTLERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFL
RSETSLVQTIGRAARNVDGKVILYADNMTGSMERAIAETNRRRAKQEAYNEEHGITPESV
KRSIGDILESVYEQDHVSVDAGFAEEGTTIGHNLKAHIEDLEKQMREAAADLEFETAARL
RDEVKRLQETELAVADDPMARQSSVEQQTGGFGGKKKYGASGNLPKAEADKADAGSKVHK
PRLGEMGPGTDLPTPAGATGEKKKRRTTSGRSSGGRPGTRTYRKKN
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgactaagcgccccacaaaaacttccagttcatcctcactcccagaagctgaagggtct
tcctccggctttggtgaggctccgcagccagctctttccggcagtccgttgtccggctct
gtttctgactgggctgatcagcttgctgaagaagatctttctggtctgaaggcaaagaaa
gaagccgagcagcctgctgaagagaagcctgcaccgaagaagacgacagctaagaaacca
gcggccaagaagcctgcgtcgaaggcaaagaaagcaccagcgaaatctgcgcgaggcacg
tccatgggtgcgaccagtgatccgcgcgaacgtgccaaaggtggattgaacccaattgcc
ggattggatatctcgctggaagacgctgagaagctgcttgatacgcacgtcaaggagacg
aagaaaaagcggaagaaggcgaaggaagaggcgatcaccggtgcgactgcgactgttcag
gcgctggcacggttgattgagcaggggcgttctgatgagacgggggaagatgcgtgggtg
ccgcatcgacctgagcgtcctcagaagtctgagggcggcgttgccttttctctggaatct
gagtttgagccgaaaggcgaccagccgaaagcgattgcggatctgaaagctggtttagcg
gatggtgataaaacacaggtgctgctgggtgttacggggtccggtaagaccttcaccatg
gcgcaactgatttcgcagacccagcgcccggcgttgatccttgcgccgaataagacactg
gccgcacagctttatggggagttcaaggcgttcttcccgaacaatgcggttgagtacttc
gtttcctactatgactactatcagccggaagcctatgtggcgcggacggataccttcatt
gagaaggaaagctccatcaacgaacagattgaccggatgcgccactcggcgacccgtgct
ctgctggaacgtgatgatgttatcatcgtggcgtcggtctcctgtatctacggtattggg
tcggtagagacctatacggcgatgaccttcaagctggaggttggcgagaagattgagcaa
cggcagttgctggcggatctggtggccttgcactacaagcgaaatgatgctgctttccag
cgtggaacgttccgtgtgcggggggacacgattgaagtgttcccggcgcactatgaggac
cgggcctggcgtatttccctttggggcgatgagattgaaagcatcaccgagtttgatcct
ctgaccggcaagaaatccggtgagcttcagctggtgaagatctacgcaaactcgcactac
gtgaccccgaagccgacacttaatcaggcgatcaagtccatcaagaaagagctgaagggt
cgtcttgatgagctcaatgatcatggacgcctgctggaggcgcagcggttggaccagcgc
tgtacgtttgatctggagatgatggaagcgaccggtgcctgtgcaggtatcgagaactac
tctcgctatctgacaggtcgtgcaccgggtgagccgccgccaactctgtttgaatacctg
cctgacaatgcgctggtgtttattgatgagagccacgtgaccgtgccgcagattggcgcc
atgtaccgaggtgacttccgtcgtaaagcgacgctggcggagtatgggttccgtctgccg
tcctgcatggacaaccgtccgctccggtttgaagagtgggatgccatgcgtccgcagacg
gttgctgtgtctgcgacgccgggtggctgggagatggatgagagcggcggtgtgtttgcc
gagcaggttatccgtccgaccggcctgactgatcctgacatcgagatccggccagctaag
acgcaggtggatgatctgctgggtgaagtgcgtgaaaaggcggcaaatggcttccgtacg
ctggtgaccacactgaccaagcgtatggcggaggatctgaccgagtatctgcacgagaac
ggtgtgcgtgtgcgttacatgcactcggatattgatacgctggaacgtattgagatcatt
cgtgatcttcgtctcggggcgtttgacgtgctgatcgggattaacctgttgcgtgagggc
ctcgatattccggaatgtgcgctggtggctattctggatgcggataaggaaggcttcctg
cgttctgagacttcactggtgcagactattggtcgtgcggcgcgtaacgtggatggcaag
gtgatcctgtacgcagacaacatgaccggttccatggagcgtgcgattgcggagaccaac
cgtcgtcgcgccaagcaggaagcgtataacgaagagcatggcattacgccggaaagcgtg
aagcgctccatcggcgatattctggaaagcgtttacgagcaggatcacgtttcggtggat
gctggctttgctgaggaagggaccaccattggtcacaacctcaaggcccacattgaagac
cttgaaaagcagatgcgtgaagctgcggctgatcttgagtttgagacagcagcgcggctg
cgtgacgaagtcaaacgtctgcaggagactgaacttgcggtggcggatgatccgatggca
cggcagtcttccgttgagcagcagactggcggttttggtggcaagaagaagtatggcgct
tccggcaacctgcctaaggcagaggcagataaagctgatgctggcagcaaggtgcacaaa
ccgcggttgggtgagatgggaccgggaacggatctgccgacaccagctggcgctacgggt
gagaagaagaaacgccggaccacatcaggccgcagctctggtggacgtccaggtacgcgg
acgtatcggaagaagaactaa

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