Pseudovibrio sp. FO-BEG1: PSE_4809
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Entry
PSE_4809 CDS
T01669
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf00061
Fatty acid biosynthesis
psf00071
Fatty acid degradation
psf01100
Metabolic pathways
psf01212
Fatty acid metabolism
psf02024
Quorum sensing
psf04146
Peroxisome
Module
psf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSE_4809
00071 Fatty acid degradation
PSE_4809
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSE_4809
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSE_4809
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psf01004
]
PSE_4809
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psf04147
]
PSE_4809
Enzymes [BR:
psf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSE_4809
Lipid biosynthesis proteins [BR:
psf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSE_4809
Exosome [BR:
psf04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSE_4809
Exosomal proteins of breast cancer cells
PSE_4809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
YwhD
Motif
Other DBs
NCBI-ProteinID:
AEV39311
UniProt:
G8PL01
LinkDB
All DBs
Position
complement(5188214..5190172)
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AA seq
652 aa
AA seq
DB search
MDTFPQLLIRNARDWGDRPAYREKDLGIWQSWTWLEVLEEVRKLSLGLKSLGCKEGDKVA
VIGSNRPHLYWVFAAVQALGGIPIPVYADSVAEEIAYVLGHAEVRFAVAEDQEQVDKLLE
MSEKLPLLEHIIYEDPKGLRDYDHSRLHRYLTVQEAGQALLDNDEKLADDWFEAVKAGKS
EDVAVILYTSGTTGRPKGVMLTFNNLVVAVQNANKFDNLDENADTVAYLPMAWVGDHVFS
YAQCLTAGYCVNCPEGPETVSIDRKEIAPTYMFAPPRVFEGMLTHITVRMEDAGKMKKKL
FDYFLDYANKVGERILNGEKVSLFERMKYAIGEFCVYGPLKNEMGFSRVRVAYTAGEAIG
PEIFKFYRSIGLNLKQLYGQTESSVFITSQPDGQIYADTVGVPMPDVEVKIAESGEVMYR
SPGAFLGYYKNEDATKDTKTEDGWVHTGDAGMFLENGHLKIIDRAKDVGKLNDGSMFAPK
YIENKLKFFPNIKEAVTFGNERDYVCAFVNIDLVAVGNWAERNNIAYASYQELAAHPDVY
KTIQSHVDQVNKDLSEEPMMAGAQIKRFLVLHKELDPDDGELTRTQKVRRNFVADRYAPL
IEAFYAGETSKHVVTEVTFEDGRQGSIEATVEIRDMETYNSKAMSAIGEAAE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggatacatttccgcagttgcttattcggaatgcgcgggattggggggatcgccccgcg
tatcgcgagaaggacctcgggatctggcagagctggacctggcttgaagtccttgaggaa
gttcgcaagctctcactggggttgaaaagccttggatgtaaagagggcgacaaagttgcg
gtgattggttcaaaccgtccgcacctttattgggtctttgcagcagtgcaggctctgggt
ggtattccgatcccggtctatgctgactctgtggcagaagagatcgcttacgttcttggc
cacgcagaagttcgctttgcagttgctgaggatcaggagcaggttgataagctgctcgaa
atgtctgagaagctgccgctgcttgagcatatcatttacgaagaccctaagggccttcgc
gattatgatcactcacgtcttcatcgttatctgactgttcaggaagctgggcaggcattg
ctcgacaatgatgaaaagcttgctgatgactggtttgaagcagtcaaagccgggaaaagc
gaagacgttgcagtgatcctttacacctctggtacgactggacgtccaaaaggggtgatg
ctgaccttcaacaatctggttgttgctgttcagaatgcgaacaagttcgataatctggat
gagaacgctgacacggttgcgtacctgccgatggcatgggttggtgaccatgtgttctcc
tatgctcagtgtcttaccgccgggtattgcgtaaattgtccggaaggccctgagacggtt
tcaatcgaccgtaaggaaattgctccaacttacatgtttgcgccaccgcgcgtgtttgaa
gggatgctgacgcacatcactgttcgcatggaagatgcgggcaagatgaagaagaagctg
tttgactacttcctcgattatgcgaacaaggttggtgagcgcatcctgaacggagaaaag
gtttctctgtttgagcgtatgaagtatgcgatcggtgagttctgcgtttatggcccgctg
aagaacgagatgggcttttctcgcgttcgtgtggcttataccgcgggtgaagcgattggt
cctgagatcttcaagttctaccgctcaattggcctgaacctgaaacagctttacggacag
acagaatcttccgtgttcatcacctctcagcctgatggtcagatttacgctgatactgtt
ggtgttcccatgccggatgttgaggtgaagatcgctgagagcggtgaggttatgtaccgt
tcgccgggtgcgttccttggttattacaagaacgaggatgcaacgaaggataccaagacc
gaggatggttgggttcacacaggtgatgccggcatgttccttgagaatggtcacctgaag
atcattgaccgtgcgaaggacgtgggcaagctgaatgacggctccatgtttgcgccgaag
tacattgagaacaagctgaagttcttcccgaacatcaaagaggctgtgacctttggaaat
gagcgtgactacgtttgtgccttcgtgaacattgatcttgttgccgttggtaactgggcg
gagcgtaacaacattgcttatgcgtcctatcaggaactggctgcgcatcctgatgtctac
aagacgatccaaagtcacgttgatcaggtgaacaaggatctttccgaagagccaatgatg
gccggtgctcagatcaaacgcttcctggttctgcataaagagctggatccggatgatggt
gaactgacgcgtacccaaaaggttcgccgtaacttcgttgctgaccgttatgcgccgctg
attgaagcattctatgccggtgagacctccaaacatgtggtgactgaagtgaccttcgaa
gacggtcgtcagggttcgatcgaagccaccgtcgagatccgtgacatggaaacttataat
agtaaggcaatgtccgcgattggggaggcggcagaatga
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