Pseudovibrio sp. FO-BEG1: PSE_4817
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Entry
PSE_4817 CDS
T01669
Name
(GenBank) WD-repeat family protein
Organism
psf
Pseudovibrio sp. FO-BEG1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_NUP159_NUP214
Vgb_lyase
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Motif
Other DBs
NCBI-ProteinID:
AEV39319
UniProt:
G8PL09
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Position
complement(5199548..5200525)
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AA seq
325 aa
AA seq
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MPVTAPLDTDGFVVSATFLGDVAAFASGEGSVFFAGGPETQTPVHKNGLLCATPSLDGKS
LITGGGDGKICKVSADGSVEELAEQPRKWIDIIAAGPQDSVAFASGRTAWVRLKTGEIKE
FQLPRAFAGLAFAPKGMRLAASRYDGVTLFWVNAAGDPQELSWKGAHGHVTYSPDGKYLV
TTMQENALHGWRLADSQDMRMTGYPAKVKSVSWSAKGKYLATSGAQAAILWPFMGKSGPM
GQAPLELGVRGDSMVTTVCCHPQEEMLAIGYQDGMVMAVRFSDNAEVLLRRPGAGPVSAL
AWDKKGDRLAFGTEEGAAGVITLLD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgtaactgctcctcttgataccgacggttttgttgtttcggcaaccttcctcgga
gacgtagcagcctttgccagtggtgaaggttctgtcttttttgctggtggtcctgaaacg
caaacaccggttcacaaaaacggtttgctctgtgcaacgccttcactggatggcaagtct
ctgatcaccggtggtggtgatgggaagatctgcaaggtcagtgctgatggcagtgttgaa
gagcttgctgaacaacctcgcaagtggatcgacattattgctgcaggtccgcaagacagt
gtggcgtttgcctctggccgtacggcttgggttcgcctgaagacaggtgagatcaaagag
tttcagctgccacgtgcgtttgcaggtttggcttttgcgccaaagggtatgcgccttgca
gcgtcccgttatgacggtgtgacgctgttttgggtgaatgctgctggtgatccgcaggag
ctgagctggaagggtgcacatggtcatgtgacttactctccagatggcaaataccttgtg
accaccatgcaggagaacgctctgcatgggtggcgtctggccgacagtcaggacatgcgg
atgacgggctatccggccaaggtgaagtctgtgagctggtctgcaaagggtaagtatcta
gcgacatccggtgcgcaggctgcgatcctgtggccattcatgggtaagtctggcccaatg
gggcaggcgcctctggagctgggcgtgcgtggcgacagtatggtgacgaccgtttgctgc
catccgcaggaagagatgctggcgattggttatcaggatggcatggtgatggctgtgcgg
ttctctgataatgccgaggttctgctgcgccgtccgggtgctggtcctgtttctgcgctt
gcgtgggataagaagggcgatcgtctggcgtttggtacagaagaaggtgctgctggagtg
atcactctgctggattaa
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integrated database retrieval system