Pseudovibrio sp. FO-BEG1: PSE_4872
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Entry
PSE_4872 CDS
T01669
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psf03021
]
PSE_4872
Transcription machinery [BR:
psf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSE_4872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_31
HTH_3
KORA
Sigma70_r4_2
HTH_10
Rv0078B
DUF3112
Motif
Other DBs
NCBI-ProteinID:
AEV39374
UniProt:
G8PLV4
LinkDB
All DBs
Position
5260065..5260934
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AA seq
289 aa
AA seq
DB search
MAQYERDQSLGPLARLARKAPYLSKEEEYKLLEGWITKRDHRALDKLSLSHSRLVIAQAL
RFKSYGVPLSDLIQEGHIGLMEAANRFKLSKDVRFSTYASWWIKSFIQDYVLRNQSIVRG
GTSSRQKMLFFGFKRMRAELASKHPELSEDQLHQQISNQTGANMRDIKMMSSRLGRSDTS
LNATLKGSETNLQLQDTLAADEPLPDEIVEVHLDSERAERRLFDAIKTLPPREQRVIRDR
KLREDGVTLEALGKKLGVSKERVRQIESRAMQKLKDAMAPSQGHEANQP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatatgaaagagaccaaagtctcgggccccttgctcgcctggcaagaaaagcc
ccatatctgtcaaaagaagaagaatacaagcttcttgaaggctggatcacaaaacgcgat
caccgcgcgctggacaaactatccttgtcccactcccgtctggtgatagcccaagccttg
cgcttcaaatcctatggcgtcccactttctgatctcatccaagaaggccacatcggactg
atggaagcagccaacagattcaagctatccaaggatgtgcgcttctccacttacgcaagc
tggtggatcaagtccttcattcaggattacgtcctccgcaatcaatccatcgtccgcggc
ggtacatcctcgcgccagaaaatgctgttctttggctttaagcgcatgcgcgcagagcta
gcaagcaaacatcctgagctcagcgaagaccagcttcatcagcagatctcaaaccaaacc
ggcgcgaacatgcgagatatcaagatgatgtcttccagattaggccgttcggatacatct
ttgaatgcaacgctcaaaggcagcgaaacaaaccttcagctccaggacacgctcgcagca
gatgagcctctacccgatgagatcgtagaagtgcatctggacagtgaacgcgccgaacgt
cgcctcttcgacgccatcaaaacactgcccccacgcgagcaacgcgtaataagagatcgc
aagctcagagaagatggcgtgacgctggaagcacttggcaagaaactgggtgtctcaaaa
gaacgcgtccgtcagatcgagtcacgtgccatgcagaaactgaaagatgcgatggctccg
tctcagggacacgaagccaatcagccttaa
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