Pseudovibrio sp. FO-BEG1: PSE_5025
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Entry
PSE_5025 CDS
T01669
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PSE_5025
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GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
T2SSK
S1_RRP5
YqgF
OB_RRP5_4th
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AEV39527
UniProt:
G8PNN5
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Position
complement(5412147..5414603)
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AA seq
818 aa
AA seq
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MSDLSSVASSSSPAKAGALPADVALRISQRIAGEIGCAPGQVNSAVQLLDEGSTVPFIAR
YRKEATGGLDDSQLRTLEERLIYMREMEDRRKAIVKSIDEQGKLTDELAKQIASADNKAA
LEDLYLPYKKKRRTKAQIAREAGIEPLADLLLGDPSKMPESEAGSFVDAEKGFADTKAVL
DGARQILMERFSENAQLVGKLRNYVARQGAVKAEVVAGKEQEGAKFSDYFGYSENWKNIP
SHRALALLRGRNEGILALDLKVDEDDVSAVKPVEQMIADAAGIENKGRPADKWLSDVCRW
TWKVKIGLHVELDLMSELRDKAEEEAIKVFARNLKDLLLAAPAGPRATLGLDPGIRTGVK
VAVVDATGKLVDTATIYPFQPRNDIRGSLATLRMLVAKHGVSLIAIGNGTASRETDKLAA
DLLKDIPAEHRPTKVMVNEAGASVYSASALAAKEMPDVDVSLRGAASIGRRLQDPLAELV
KIEPKSIGVGQYQHDVNQTKLARSLDGVVEDAVNAVGVDLNTASAPLLAHISGLTDSLAK
AVVEYRDTVGAFKNRKELLKVARLGPKAFEQCAGFLRIADGDNPLDASSVHPEAYPVAQK
IIKACGRDIREIMGSNLLSNLDPKEFTDEKFGLPTVKDIFSELEKPGRDPRPEFKTASFQ
DGVETMQDLKPGMMLEGTVTNVTNFGAFVDIGVHQDGLVHVSQLADRFVDDPHTVVKAGD
IVKVRVVEVDIARKRIGLTLRKDSADARENARERQAERGGGRNHGGGRPGGGNRPNGGNR
GGGPRGGGRGGNKPADNGGGGNNAMAAALAAAFNKPKR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctgagctctgttgcttcctcttcctctcctgccaaagctggtgcattgcct
gcggatgttgctttgcggatttctcagcggattgctggtgaaattggctgtgcgccgggg
caggtgaattctgcggtgcagttgttggatgaaggctctacggttccgtttattgcacgt
taccgtaaagaagcgacgggcgggttggatgatagccagctgcgtacgttggaagagcgc
ctgatttacatgcgtgagatggaagatcgccgcaaagcgattgtgaaatccattgatgag
cagggcaagctcaccgacgagctggcaaagcagattgcgtcggcggataacaaagctgcg
ctagaagatctctatttgccttacaaaaagaagcgccgcaccaaagcgcagattgcgcgc
gaagctggcattgagccgctggctgatctgctgctgggtgatccgagcaagatgcctgag
agtgaagcgggtagttttgttgatgcggagaagggctttgcggacacaaaggccgtgctg
gatggggcacgtcagatcctcatggagcggttttccgagaacgctcagctggttggtaag
ctgcgtaactatgtggcgcgtcaaggtgctgtgaaggcggaagttgttgcgggcaaagag
caggaaggcgcgaagttctctgattacttcggctactccgagaattggaagaacattcca
agtcaccgtgcactggcgctgttgcgtggtcgtaacgaaggcattctggcgctggacctg
aaggtggatgaggatgatgtttccgctgtgaagccggttgagcagatgattgcggatgct
gcgggtatcgaaaataagggccgccctgctgacaagtggctttctgatgtgtgtcgctgg
acgtggaaggtgaagattggccttcatgttgagctggacctgatgagtgagctgcgcgac
aaggcggaagaagaagcgatcaaggtttttgctcgcaacttgaaagacttgctgttggca
gctcctgctggtccgcgtgcgacgctggggcttgatccgggtattcgtaccggtgtgaag
gtggctgttgttgatgctacgggcaagctggtagatacggcgaccatctacccattccag
ccacgcaatgacattcggggctcattagcaacgctgcggatgctggttgccaagcatggc
gtgagcctgattgcgattggtaatggtactgcgagccgtgagacggataaattggctgca
gacttgctgaaggacattcctgccgagcatcgcccaaccaaggtgatggtgaacgaggca
ggtgcttctgtttactcagcctctgcgttggcagcgaaagagatgccggatgttgatgtg
tcgcttcgcggtgcggcttcgatcggtcgtcgtttgcaagatccgctggcggagctggtg
aaaattgagccgaaatccattggtgttgggcaatatcagcatgatgtgaaccagaccaag
ctggcacgttctctggacggtgttgttgaggatgcggtgaacgcggttggggttgatctc
aacacagcgtcggctccgctgctggcacatatctccggcctgactgatagccttgccaag
gcggtggttgagtatcgtgacacagttggtgcgttcaaaaaccgcaaagaactgctgaag
gtggctcgtcttgggccgaaagcgtttgagcagtgtgcgggcttcctgcggattgcagat
ggcgataacccgctggacgcgtcttctgttcacccggaagcttatccggtggcgcagaag
atcatcaaagcgtgtggtcgggacattcgcgagatcatgggttccaacctgctgagcaat
ctggatccgaaagagtttacggatgagaagttcggcttgccgactgtgaaggacatcttc
tcagagctggaaaagccgggccgtgatccgcgccctgagttcaagaccgcctctttccag
gatggtgttgagaccatgcaggatctgaagccgggtatgatgctggaaggcactgtcacc
aacgtaaccaactttggcgctttcgttgatatcggtgtgcatcaggatggtctggtgcat
gtgtctcagctggctgaccggttcgtggatgatccgcatacggtggtgaaggctggcgac
atcgtgaaggtgcgtgttgttgaggtggacattgcccgcaaacgtatcggtctgaccttg
cgcaaagacagcgcggatgctcgcgaaaatgcacgggagcgtcaggctgagcgtggcggt
ggacgcaatcacggtggtggtcgtccgggtggcggcaatcgcccgaatggtggcaaccgt
ggtggtgggcctcgcggtggtggccgtggaggtaataagccagcggataatggtggtggt
ggcaacaacgccatggctgctgcactggctgcggcgttcaataagccgaagcgctaa
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