Pseudovibrio sp. FO-BEG1: PSE_5078
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Entry
PSE_5078 CDS
T01669
Symbol
soxR
Name
(GenBank) Redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
psf
Pseudovibrio sp. FO-BEG1
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psf03000
]
PSE_5078 (soxR)
Transcription factors [BR:
psf03000
]
Prokaryotic type
Helix-turn-helix
MerR family
PSE_5078 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_3
HTH_23
HTH_24
Sigma70_r4_2
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AEV39580
LinkDB
All DBs
Position
5467764..5468240
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AA seq
158 aa
AA seq
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MKHSDVMTIGELAERSGLTTSAIRFYETKGIVTASRNAGGQRRFMRADIRRLSFALVAQE
FGFTIKEISEQLGTLPPGRAPNKAEWKRLSQQFKVHLDERITRMERLRSQLEGCMGCGCL
SLDKCELYNAGDAAASYGRGPRFIYGDKSFRQQAEPAE
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgaagcactcagacgtcatgacaatcggtgaactcgccgaaagatccggcctcaccaca
tccgccatccgcttttacgaaaccaagggaatagtcacagccagccgcaacgcaggcggc
caacgccgcttcatgcgcgctgacatccgccgcttgtcttttgctctcgtcgcacaagag
tttggcttcaccatcaaagagatttcagagcaactgggaacgttgccaccaggccgtgca
cccaacaaagcggaatggaaacgcctgagccaacagttcaaagtgcacttagatgaacgt
atcacccgcatggaacgcttaagatcccaactggaaggctgcatgggctgtggctgcctc
tcgctcgacaaatgcgagctctacaacgctggcgacgccgccgccagctacggccgcggc
cctcgcttcatctacggtgacaaatcattcaggcagcaagcagaaccagctgaatga
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