Pseudomonas aeruginosa B136-33: G655_02180
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Entry
G655_02180 CDS
T02627
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psg
Pseudomonas aeruginosa B136-33
Pathway
psg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G655_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psg03019
]
G655_02180
Enzymes [BR:
psg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G655_02180
Messenger RNA biogenesis [BR:
psg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G655_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGI79361
LinkDB
All DBs
Position
complement(469748..471667)
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AA seq
639 aa
AA seq
DB search
MSFSSLGLSEALARAVEAAGYSQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPVL
ERLFPAGHPDREHRHGPRQARVLVLTPTRELAAQVHDSFKVYARDLPLNSTCIFGGVGMN
PQIQALAKGVDVLVACPGRLLDLAGQNKVDLSHVEILVLDEADRMLDMGFIHDVKKVLAK
LPPKRQNLLFSATFSKDIVDLANKLLHNPERIEVTPPNTTVERIEQRVFRLPAPQKRALL
AHLVTVGAWEQVLVFTRTKHGANRLAEYLTKHGLPAAAIHGNKSQNARTKALADFKANDV
RILVATDIAARGLDIDQLPHVVNYELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKAIEKMTRQRIPDGDAQGFDPEAVLPEVAQPEPREAPQKQPRRDKERRSSRERKPKDAQ
ASNPDSNVAAAQDGTEKPAGKRRRRGGKNKENREAGQAQQPRQSREARPAKPNRPPEVDG
NRDPEEFLDDDFDNFGNRADYVSPYQGQENKGRGRRGGQQKPQGGTGQQGRGQGQGQARG
KSQGAAQGGARGQGAGQGKAKKPRASKPRGQGRENASRMSDAPLREPSEYGTGKQPSRQP
VVINKRDLVRMDRFPTAEQLDELEPRRKGERPALLTRNR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttcttccctcggactctccgaggcgcttgcccgcgctgtggaggctgcgggc
tacagccagcccactcccgtgcaacagcgggcgattcccgccgtgttgcaaggtcgcgac
ctgatggttgcggcacagaccggcaccggcaagaccggtggtttcgccctgccggtactg
gagcgcctgttccccgccggtcatcccgaccgcgaacaccgccacggcccgcgccaggcg
cgcgtgctggtactgaccccgacccgtgagctggccgcccaggtgcatgacagcttcaag
gtctacgcccgcgacctgccgctgaacagcacctgcatcttcggcggggttggcatgaac
ccgcagatccaggccctggccaagggcgtcgacgtactcgtcgcctgccccggccgcctg
ctcgacctggccgggcagaacaaggtcgacctgtcccacgtggaaatcctcgtcctcgac
gaagccgaccgcatgctcgacatgggcttcatccacgatgtgaagaaggttctcgccaag
ctgccgcccaagcgccagaacctgctgttctcggctaccttctcgaaagacatcgtcgac
ctcgccaacaagctcctgcacaacccggaacgcatcgaggtaacgccgccgaacaccacg
gtcgagcgcatcgagcaacgcgtgttccgcctgccggcgccgcagaagcgcgccctgctg
gcgcacctggtgaccgtcggcgcctgggaacaggtgctggtcttcacccgtaccaagcac
ggcgccaaccgtctcgccgagtacctgaccaagcacggcctgccggccgccgcgatccat
ggcaacaagagccagaacgcgcggaccaaggcgctggccgacttcaaggccaacgacgtg
cgcatcctggtggcgaccgacatcgccgcccgcggcctggatatcgaccagttgccccat
gtggtcaactacgaactgcccaacgtcgaggaagactacgtccaccgcatcggccgtacc
ggccgcgccggacgcagcggcgaggcgatctcgctggtggcgccggacgaagagaagctg
ctcaaggccatcgagaagatgaccagacagcgtattcccgatggcgatgcccagggtttc
gaccccgaggccgtgctgcccgaggtggcccagccggagccccgcgaggcgccgcagaag
cagccgcgccgcgacaaggaacggcgcagcagccgcgagcgcaagccgaaagacgcccag
gcgagcaaccccgacagcaatgtcgctgcggcccaggacggtaccgagaagccggccggc
aagcgccgccgtcgtggtggcaagaacaaggaaaaccgcgaggccggccaagcgcagcag
ccgcggcagagccgcgaagcgcgtccggccaagcccaatcggccgccggaagtcgacggt
aatcgcgatccggaagagttcctcgacgacgacttcgacaatttcggcaaccgcgccgac
tacgtcagcccctaccagggccaggaaaacaagggacgcggacgccgcggtggccagcag
aaaccccagggcggtaccggccagcagggtcgtggccaaggccagggccaagctcgcggc
aagagccagggcgccgctcaaggcggcgctcgcggtcagggtgccggccagggcaaggcg
aagaaaccgcgcgccagcaagccgcgcggccagggtcgcgagaatgcctcgcggatgagc
gacgcgccgctgcgcgagccgtccgagtacggcaccggcaagcagccgagccgccagccg
gtggtgatcaacaagcgcgacctggtgcgcatggatcgcttccccaccgccgagcagctc
gacgagctggagccgcggcgcaagggcgagcgccccgcactgctgacccgcaaccgctaa
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