Pseudomonas aeruginosa B136-33: G655_04930
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Entry
G655_04930 CDS
T02627
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psg
Pseudomonas aeruginosa B136-33
Pathway
psg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G655_04930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psg03019
]
G655_04930
Enzymes [BR:
psg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G655_04930
Messenger RNA biogenesis [BR:
psg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G655_04930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGI79911
LinkDB
All DBs
Position
1051337..1052686
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AA seq
449 aa
AA seq
DB search
MTFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLL
QRLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK
LRKGVDILVATPGRLLDLYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR
QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLLQ
ANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLVA
TDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAIE
TLIGQTLQRREEPDFAPEHRVPQTAPGGVVLKKPKKPKKPKAAESAGKPGKIHLGSWFDS
SAPTVKAVRKAPGFGAGAAGKPKKRPSGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgcttccctcggtctgctcgaccccctgctcaaggccctcgaagggctcggc
cacggcacgcctacgccgatccaggcccaggccatacctccggcgctcaagggccgcgac
ctgctcgccgcagcacagactggcaccggcaagaccgccggtttcgccctgccgttgctg
cagcggctgaccctggaggggccgcaggtcgctgccaactcggtgcgcgcactggtcctg
gttccgacccgcgaactggccgagcaggtccacgccagcgtccgcgactacggccagcac
ctgccgctgcgtaccgcggtggcctacggtggggtcagcatcaacccgcagatgatgaag
ctgcgcaagggagtggatatcctcgtcgccactcccgggcggctgctcgacctgtatcgg
cagaacgcggtgaagttcgcccagctccaggcgttggtgctggacgaagccgatcgcatg
ctcgacctcggtttcgcccgcgagctggacgaactgttcgccgcgctgccgcgcaagcgc
cagaccctgctgttttccgcgaccttctccgacgccatccgcacgctggcccgtgaactg
ctgcgcgacccgctgtccatcgaggtcagtccgcgcaataccgcggcgaagagcgtcagg
caatggctggtgccggtggacaagaagcgcaaggccgagctgttctgccacctgttgcag
gccaatcgctggcgccaggcgctggtcttcgccaagacccgcaagagcgtcgaggaactg
gtcggactgttgcagcggcagggtatcgccgccgactcgatccatggcgacaagccgcag
ccggcgcggctgcgcgccttgcagcggttcaaggccggcgaggtagacctgctggtagcc
accgacgtggccgcgcgtggcctggatatcgaggaaatgccgctggtggtcaacttcgac
ctgccgatcgtcgccgaggactacgtgcatcgcatcggccgtaccggccgtgccggtgcc
tccggccaggcggtgtcgctggtctgcgccgacgaagtggagctgctggcggcgatcgag
acactgatcgggcagaccctgcagcgccgcgaggagcccgacttcgcgccggaacaccgg
gtgccgcagaccgcgccggggggcgtggtgctgaagaaaccgaagaagccgaagaaaccc
aaggctgcggagagcgccggcaagcccggcaagatccacttgggcagttggttcgacagc
agcgcgccgacggtcaaggcggtgcgcaaggcgccgggcttcggcgcgggcgcggcgggc
aagccgaagaagcggccgtccggcaaatag
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