Pseudomonas aeruginosa B136-33: G655_07385
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Entry
G655_07385 CDS
T02627
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psg
Pseudomonas aeruginosa B136-33
Brite
KEGG Orthology (KO) [BR:
psg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psg03009
]
G655_07385
Enzymes [BR:
psg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G655_07385
Ribosome biogenesis [BR:
psg03009
]
Prokaryotic type
rRNA helicases
G655_07385
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AGI80400
LinkDB
All DBs
Position
1602255..1603580
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AA seq
441 aa
AA seq
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MFSQFPLHERLLKALESLSFSEPTPVQAAAIPKALEGHDLRVTAQTGSGKTAAFLLPLLH
RLLAEDKPRSLARALILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRK
NPEIIIGTPGRLLEQRNAGNLPLQDIEVLVLDEADRMLDMGFADDVLALANACPAERQTL
LFSATHSGAGLNKVIAEVLREPQVLRLNQVGELNENVRQQVITADDVAHKEQLLQWLLSN
ETYTKAIVFTNTRVSADRLTGRLIANQHKVFVLHGEKDQKDRKLAIERLKQGAVKILVAT
DVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHGDWNLMSSVER
YLKQNFERRNIKELKAAYQGPKKLKASGKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAG
PSAVVSADGMAPLKRKKPTAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
ttgttcagccaatttcccctccacgaacgcctgctgaaggcactggaaagcctgtccttc
agcgagccgacgccggtccaggccgcggccattcccaaggcgctggaggggcacgacctg
cgggtcacggcgcagaccggcagcggcaagaccgcggccttcctgctgccgctgctgcac
cgcctgctggccgaggacaagccgcgctccctggcgcgcgcgctgatcctcctgccgacc
cgcgagctggcccagcagaccctcaaggaagtcgagcgcttcgcccagttcaccttcatc
aaggcctgcctgatcactggcggcgaggacttcaaggtgcagggggcgcgcctgcgcaag
aacccggagatcatcatcggcacccccggccgcctgctcgagcagcgcaacgccggcaac
ctgccgttgcaggacatcgaggttctggtgctggacgaggccgaccgcatgctcgacatg
ggcttcgccgacgacgtgctggccctggccaatgcctgcccggccgagcgccagaccctg
ctgttctccgccacccacagcggcgccgggttgaacaaggtgatcgccgaggtgctgcgt
gagccgcaagtgctgcgcctgaaccaggtcggcgagctgaacgagaacgtccgccagcag
gtcatcaccgccgacgacgtggcgcacaaggaacagttgctgcaatggctgctgagcaac
gagacctacaccaaggccatcgtcttcaccaatacccgggtctccgccgatcgcctgacc
gggcggctgatcgccaaccagcacaaggtcttcgtcctgcatggcgagaaggaccagaag
gaccgcaagctggccatcgagcgcctgaagcagggcgcggtgaagatcctcgtcgccacc
gacgtcgccgcacgcggcctggacgtcgaaggcctggacctggtgatcaacttcgacatg
ccgcgcagcggcgacgagtacgtgcaccgcatcggccgcaccggtcgcgccggcgccgag
ggcctggcgatctcgctgatctgccatggcgactggaacctgatgtcgagcgtcgaacgc
tacctcaagcagaacttcgaacgacgcaacatcaaggaactgaaggccgcctaccagggg
ccgaagaagctcaaggcctcgggcaaggccgccggcagcaagaagaaaaagcaggacagg
aagggcgccgccgccaagcccgcggccaagcgcaagcccgccgcgcggccgaaggccggg
ccgtcggcggtggtcagcgccgacggcatggcgccgctcaagcgcaagaagccgacggcg
gagtga
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