Pseudomonas aeruginosa B136-33: G655_09910
Help
Entry
G655_09910 CDS
T02627
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
psg
Pseudomonas aeruginosa B136-33
Pathway
psg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G655_09910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psg03019
]
G655_09910
03009 Ribosome biogenesis [BR:
psg03009
]
G655_09910
Enzymes [BR:
psg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
G655_09910
Messenger RNA biogenesis [BR:
psg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G655_09910
Ribosome biogenesis [BR:
psg03009
]
Prokaryotic type
rRNA processing factors
G655_09910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AGI80905
LinkDB
All DBs
Position
complement(2145061..2148225)
Genome browser
AA seq
1054 aa
AA seq
DB search
MLINATQPEELRVALVDGQRLFDLDIESGAREQKKANIYKGRITRVEPSLEAAFVDFGAE
RHGFLPLKEISREYFKKSPEGRINIKEVLSEGQEVIVQVEKEERGNKGAALTTFISLAGR
YLVLMPNNPRAGGISRRIEGEERNELREALNGLNAPADMGLIVRTAGLGRSTEELQWDLD
YLLQLWSAIKEASGERGAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEEALNFIR
QVMPQYASKVKLYQDSVPLFNRFQIESQIETAFQREVKLPSGGSIVIDPTEALVSIDINS
ARATKGGDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEERVREA
LEADRARVQVGRISRFGLLEMSRQRLRPSLGETSGIVCPRCNGQGIIRDVESLSLAILRL
IEEEALKDRTAEVRARVPFQVAAFLLNEKRNAITKIELRTRARIFILPDDHLETPHFEVQ
RLRDDSPELVAGQTSYEMATVEHEEAQPVSSTRTLVRQEAAVKTVAPQQPAPQHTEAPVE
PAKPMPEPSLFQGLVKSLVGLFAGKDQPAAKPAETSKPAAERQTRQDERRNGRQQNRRRD
GRDGNRRDEERKPREERAERQPREERAERPNREERSERRREERAERPAREERQPREGREE
RAERPAREERQPREGREGREERSERRREERAERPAREERQPREGREERAERPAREERQPR
EDRQARDAAALEAEALPNDESLEQDEQDDTDGERPRRRSRGQRRRSNRRERQREVSGELE
GSEATDNAAAPLNTVAAAAAAGIAVASEAVEANVEQAPATTSEAASETTASDETDAPTSE
AVETQGADSEANAGETADIEAPVTVSVVRDEADQSTLLVAQVTEEAPFASESVESREDAE
SAVQPATEAAEEVAAPVPVEAAAPSEPATTEEPTPAIAAVPANATGRALNDPREKRRLQR
EAERLAREAAAAAEAAAQAAPAVEEIPAVASEEASAQEEPAAPQAEEIAQADVPSQADEA
QEAVQAEPEASGEDAADTEHAKKTEESETSRPHA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcaacgcgactcaacccgaggagttgcgtgttgcactggtcgacggccaacgc
ctgttcgacctcgacatcgagtcgggcgcccgcgagcagaagaaggccaacatctacaaa
ggccgcatcactcgcgtcgaacccagcctcgaagccgccttcgtcgacttcggcgccgaa
cgccacggcttcctccccctcaaagaaatctcccgcgaatacttcaagaaatcccccgaa
ggccggatcaacatcaaggaagtcctgagcgaaggccaggaagtcatcgtccaggtcgag
aaggaagagcgcggcaacaagggcgccgccctgaccaccttcatcagcctggccggccgt
tacctggtgctgatgccgaacaacccgcgcgccggcggcatctcccgccgtatcgaaggc
gaagaacgcaacgagctgcgcgaggccctgaacggcctcaacgcaccggccgacatgggc
ctgatcgtgcgcaccgccggcctcggccgcagcaccgaggaactgcagtgggacctcgac
tacctgctgcaactgtggagcgcgatcaaggaagcgtccggcgaacgtggcgcgcccttc
ctgatctaccaggaaagcaacgtcatcatccgcgccatccgcgactacctgcgccaggac
atcggcgaagtgctgatcgacagcatcgacgcccaggaagaagccctgaacttcatccgc
caggtgatgccgcagtacgccagcaaggtgaagctgtaccaggacagcgttccgctgttc
aatcgcttccagatcgagagccagatcgagaccgccttccagcgtgaagtgaagctgccg
tccggcggctccatcgtcatcgacccgaccgaggccctggtttccatcgacatcaactcg
gcgcgcgccaccaagggcggcgacatcgaggaaaccgccctgcagaccaacctggaagcg
gccgaggaaatcgcccgccagctgcgcctgcgtgacatcggcggcctgatcgtcatcgac
ttcatcgacatgaccccggcgaagaaccagcgcgccgtggaagagcgtgtccgcgaagcc
ctcgaggccgaccgcgcgcgcgtccaggtcggtcgcatctcgcgcttcggcctgctggaa
atgtcccgccagcgcctgcgtccgtccctcggcgagaccagcggcatcgtctgcccgcgc
tgcaacggccagggcatcatccgcgatgtcgagtcgctgtcgctggccatcctgcgcctg
atcgaggaagaagccctgaaggaccgcaccgcggaagtccgcgcccgcgtgcccttccag
gtcgccgccttcctgctcaacgagaagcgcaacgccatcaccaagatcgaactgcgtacc
cgcgcgcgcatcttcatcctgccggacgatcatctggaaaccccgcatttcgaagtccag
cgtctgcgcgatgacagccccgaactggttgccggccagaccagctacgaaatggccacc
gtcgagcacgaagaagcccagccggtcagctcgacccgcaccctggtccgccaggaagca
gcagtcaagaccgtcgctccccagcagcccgcaccgcaacataccgaagcaccggtcgaa
ccggccaagccgatgcccgagccgagcctgttccagggcctggtgaagtccctggtcggc
ctgttcgcaggcaaggatcaacctgccgccaagcctgctgaaaccagcaagccggctgcc
gagcgccaaacccgccaggacgagcgtcgcaacggccgccagcagaaccgccgccgcgat
ggccgcgatggcaatcgccgcgacgaagagcgcaagccccgcgaggaacgcgcagagcgc
caaccgcgcgaagagcgcgccgaacgcccgaaccgcgaagagcgcagcgaacgccgccgc
gaagagcgcgccgagcgcccggctcgcgaggagcgccagccgcgcgaaggccgtgaagaa
cgcgccgagcgcccggcccgcgaagagcgccagccgcgcgaaggccgcgaaggtcgcgag
gaacgcagcgaacgccgccgcgaagagcgcgccgaacgcccggctcgcgaagagcgccaa
ccccgcgaaggccgtgaagaacgcgccgagcgcccggcccgcgaagagcgccagccgcgc
gaggatcgccaggctcgcgacgccgcggccctggaagccgaggcgctgccgaacgacgag
agcctggagcaggacgagcaggacgataccgatggcgagcgcccgcgccgccgctcccgc
ggccagcgtcgtcgcagcaaccgccgcgaacgccagcgcgaggtcagcggcgagctggaa
ggcagcgaggcgaccgataacgccgccgcgccgctgaacaccgtcgcagccgccgctgct
gccggtatcgctgtcgccagcgaagccgtagaagcaaacgtggagcaagccccggccact
accagcgaggctgccagcgaaaccacggcaagcgatgaaaccgacgcgccgaccagcgaa
gccgtggaaacccagggcgcggacagcgaggccaatgccggcgaaaccgccgacatcgaa
gcgccggtgaccgtcagcgtggtccgggacgaagccgaccagagcaccctgctggtcgcg
caagtcactgaagaagctcccttcgccagcgaaagcgtggaaagccgcgaagacgccgag
agcgccgtgcaaccggcaacggaagcggccgaagaagttgccgccccggtgcccgtcgaa
gcagcagcccctagcgagcccgcaaccaccgaggagccgaccccggccatcgcggcggtg
ccggccaacgcgaccggccgtgccctcaacgacccacgggaaaaacgtcgcctgcaacgc
gaagccgagcgtctggcacgcgaagccgcagcagcagccgaagcggcagctcaggccgct
cccgccgtcgaggagatcccggctgtagcgagcgaggaagcgtcggcccaggaggaacct
gctgcaccccaggctgaagaaatcgcccaggccgacgttccgtctcaggcggacgaagcc
caggaagcggtacaggccgagcctgaagcttccggcgaagacgccgccgacacagagcac
gcgaaaaagaccgaggaaagcgaaacctcgcgcccgcatgcctga
DBGET
integrated database retrieval system
