Pseudomonas aeruginosa B136-33: G655_10605
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Entry
G655_10605 CDS
T02627
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psg
Pseudomonas aeruginosa B136-33
Pathway
psg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G655_10605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psg03019
]
G655_10605
03009 Ribosome biogenesis [BR:
psg03009
]
G655_10605
Enzymes [BR:
psg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G655_10605
Messenger RNA biogenesis [BR:
psg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G655_10605
Ribosome biogenesis [BR:
psg03009
]
Prokaryotic type
rRNA helicases
G655_10605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGI81044
LinkDB
All DBs
Position
2285638..2287308
Genome browser
AA seq
556 aa
AA seq
DB search
MTQETVGFAALGIHPNVLAAIVAVGYEEPSPIQAQSIPLILEGHDMIGQAQTGTGKTAAF
ALPLLSRIDPSRREPQMLVLVPTRELALQVATACETYSKQLPGVGVVAVYGGAPMGPQLK
ALRQGAQILVATPGRLCDHLRRDEKLLATVQRLVLDEADEMLKLGFMDDLEVIFEALPES
RQTVLFSATLPASIRGIAERHLKQPKHVKIAAKTQTVARIEQVHLMVHADQKAGSIQRLL
EVEQFDALIAFVRTKQATLDYAELLERQGYRAAALNGDMPQAQRERVIESLKDGSLDIVI
ATDVAARGLDVPRITHVLNIDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVGEVRLPDAETVLEARLARLAASLTPLLDSAVEQRGAVRDELCRRLGCDAETL
AAALLARLTAGKALDLESVRREQPLTPSAPRERADRGERGERPERSGERRPMAPPSEGRA
RCRTALGARDGVAAKNLLGAILNEGGLSREDIGRIQIRDTFSLIELPEANLERLLTKLKD
TRVAGKALRLRRYRED
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggaaaccgtcggcttcgccgcgctcggtattcaccccaatgtgctcgcggca
atcgtcgccgtaggctacgaagagccttcgcctatccaggctcaatcgattccgctgatc
ctcgaaggccacgacatgatcggccaggcgcagaccggtaccggcaagaccgccgcgttc
gccctgccgctgctgtcgcgcatcgacccgagccgccgcgagccgcagatgctggtgctg
gtgccgacccgcgagctggccctgcaggtcgccaccgcctgcgaaacctattccaagcaa
ttgccgggcgtcggcgtggtcgccgtctacggcggcgcgcccatggggccgcagctgaag
gccctgcgccagggcgcacagatcctcgtcgctacccccggccgcctgtgcgaccacctg
cgccgcgacgagaagctgctggccaccgtccagcgcctggtgctcgacgaagccgacgag
atgctcaagcttggcttcatggacgacctggaagtgatcttcgaggcgcttcccgaatcg
cgccagaccgtgctcttctcggcgaccctgccggcgtccatccgtggcatcgccgagcgc
cacctgaagcagcccaagcacgtcaagatcgccgccaagacccagaccgtggcgcgcatc
gagcaggtccacctgatggtccatgccgaccagaaggccggttcgatccagcgtctgctg
gaagtcgagcagttcgacgcgctgatcgccttcgtccgcaccaagcaggccaccctcgac
tacgccgaattgctcgagcgccagggctaccgcgccgccgcgctcaacggcgacatgccg
caggcccagcgcgagcgggtcatcgagtcgctgaaggacggttcgctggacatcgtcatc
gccaccgacgttgccgcccggggcctggacgtaccgcgcatcacccacgtgctgaacatc
gacatgccctacgatcccgagtcctacgtgcaccgcatcggccgtaccggccgtgccggc
cgggaaggtcgcgcgctgttgctggtgactccgcgcgagcggcgcatgctgcaggtgatc
gagcgggtcaccgggcagaaggtcggcgaagtccgcctgccggatgccgagaccgtgctg
gaggcccgcctggcgcgcctggccgcgagcctgacgcccttgctcgacagcgccgtcgag
cagcgcggcgcggtgcgcgacgagctgtgccgtcgcctcggctgcgatgccgagaccctg
gccgccgcactgctggcacgcctgaccgccggcaaggcgctggacctggagtcggtgcgc
cgcgaacagccgctgaccccatcggcaccgcgcgagcgtgccgaccgaggcgaacgcggc
gagcgtccggagcgcagcggcgagcgtcgtccgatggcgccgccgagcgaaggccgtgcc
cgctgccgcaccgccctcggcgcgcgcgacggggtcgcggcgaagaacctgctgggcgcg
atcctcaacgagggcggcctgtcccgcgaggacatcggccgcatccagattcgcgatacc
ttcagcctgatcgaactgcccgaggccaacctcgagcgcctgctgaccaagctcaaggac
acccgcgtcgccggcaaggccctgcgcctgcgccgctatcgcgaggactga
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