Pseudocitrobacter corydidari: G163CM_04290
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Entry
G163CM_04290 CDS
T07750
Symbol
radD
Name
(GenBank) Putative DNA repair helicase RadD
KO
K19789
DNA repair protein RadD
Organism
psgc
Pseudocitrobacter corydidari
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psgc03400
]
G163CM_04290 (radD)
DNA repair and recombination proteins [BR:
psgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
G163CM_04290 (radD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_16
SLFN-g3_helicase
AAA
AAA_22
zf-tcix
DZR
TniB
DUF7577
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
UGS39744
UniProt:
A0ABY3RZJ6
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Position
complement(486512..488272)
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AA seq
586 aa
AA seq
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MTFTLRPYQQEAVDATLNHFRRHQHPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCALGLEADIYAAGLKKKESHGKVVFGSVQSVARNLDHFKSEFSLLIVDECH
RISDDDDSQYQQILAHLKSVNPTVRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPEQLDMPVVQYDFSRLQANSNGLFSEADLNRELKQQKRITPH
IISQIEEFAQDRKGVMIFAATVEHAREITGLLPANDAALITGETPGPMRDELIDAFKAQK
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNP
HDLYAPEVGAPKGKSDNVPVQVFCPGCGFANTFWGKTTADGTLIEHFGRRCQGWLEDDEG
HREQCDYRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALKLKDALVLRCSGMV
LQDGADDKGAWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITP
ADILAQQALLRHPDFVVARKKGQFWQVREKVFDYEGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacttttacacttcgcccctatcagcaggaagccgtcgacgccacccttaaccacttt
cgccgccatcagcaccctgccgtgattgtgctgcctaccggcgcaggcaaaagcctggtg
attgctgaactggcaagactggcgcgcgggcgtgtgttagtacttgcacatgttaaggaa
ctggtcgcacagaaccacgccaaatattgcgcgctgggcctggaggccgatatctacgcg
gcgggtctgaagaaaaaagagagccacggcaaagtggtgtttggtagcgtgcagtccgtc
gcacgcaatctggaccatttcaagagtgaattttcgctgttgatcgtcgatgagtgccac
cgcatcagcgatgacgacgatagccagtatcagcaaatccttgcccacctgaagagcgta
aacccaacggtacgcctgctagggctgacggccacgcccttccgcctgggaaaaggctgg
atttatcagttccactatcacggtatggtacgcggcgacgaaaaagcgcttttccgcgac
tgtatttatgaactgccgctgcgctatatgatcaaacacggctatctgacgccacccgag
cagcttgatatgccggtggtacagtacgatttcagccgcctgcaggccaacagcaacggg
ctgttcagcgaagcggatctcaatcgtgaactgaaacagcaaaaacgtattacgccgcac
atcatcagccagattgaagagtttgctcaggatcgcaaaggggtgatgattttcgccgcc
accgttgagcatgcgcgcgaaatcaccgggctgctgcccgccaacgatgcggcgctgatt
accggcgaaacgcccggcccgatgcgtgatgaactcatcgacgccttcaaagcgcagaaa
tttcgctatctggtcaacgtgtcggtattaaccaccggctttgacgccccgcatgtcgat
ctcatcgcgattctgcgcccaaccgaatcagtgagtctttaccaacaaattgtaggtcgc
ggcctgcgcctgtcgccgggaaaaacggactgtctgattctggactacgccggaaaccct
cacgatctctacgccccggaagtcggtgcgccaaaaggcaaaagtgacaacgtgccggtc
caggttttctgccccggctgcggctttgccaataccttctggggtaaaactaccgctgac
ggcacgctgattgaacactttggccgccgctgtcagggttggctggaagatgacgaaggg
caccgggaacagtgcgactaccgcttccgcttcaaaaactgcccacagtgtaatgcggaa
aacgatatcgccgcccgccgctgccgggagtgcgacacggtgctggtcgacccggacgat
atgcttaaagcggcgctgaagctcaaagatgcgctggtgctgcgctgtagcggcatggtg
cttcaggacggcgcggatgacaaaggcgcgtggctgaaaatcacctactacgatgaagac
ggtgccgatgtgagtgagcgcttccgtctgcatacaccggcgcagcgtaccgcctttgaa
cagctctttatacgcccgcatacccgcacgcccggcgtgccgctgcgctggataacgccc
gccgatattcttgcccagcaggcgctgttgcgccatcccgattttgtggtggcccgtaag
aaagggcagttctggcaggtgcgcgagaaggttttcgactacgaaggccgcttccgtcgc
gccaatgaattacgcggataa
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