Pseudocitrobacter corydidari: G163CM_05490
Help
Entry
G163CM_05490 CDS
T07750
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G163CM_05490 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psgc03400
]
G163CM_05490 (alkA)
Enzymes [BR:
psgc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
G163CM_05490 (alkA)
DNA repair and recombination proteins [BR:
psgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G163CM_05490 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UGS39864
LinkDB
All DBs
Position
629025..629864
Genome browser
AA seq
279 aa
AA seq
DB search
MFELSWQAPYDWPWMWGFLQARAVAGIERFEAGRYTRSFEYHGHRGVITMASDESRQVLR
VTLSEGLLPVADSCLARISRLLDLNCAPQAINDTLGTLASARPGLRLPGSMDAFEQGVRA
ILGQLVSVSMAAKLTGKVAIAFGEPLPDFPGFYLFPRPEQLINADPQQLKALGMPLRRAE
SLIYLASAALSGELPITAPDDIEQGMKTLQSFPGIGRWTANYFALRGWQASDVFLPDDYL
IKQRFPGMTPTQIRRYAERWHPWRSYALLHIWYTEGWAP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaattatcgtggcaggcaccctacgactggccgtggatgtggggatttttacag
gcgcgtgcggtggcgggtattgagcgttttgaggcgggtcgctacacgcgcagttttgaa
taccacgggcatcgtggcgtcatcaccatggcgtcggatgaatcgcgacaggtgctgcgg
gtcacgctttcggaagggttattacccgtggccgacagttgcctggcgcggatttcgcga
ctgctggatctcaactgtgcgccgcaggccattaatgacacgctgggcacgctggcaagt
gcgcgaccggggttgcgcttaccgggatccatggatgcgttcgagcagggcgtcagggca
atactcgggcaactggtcagcgtgtcgatggcggcaaaattaaccggcaaagtggctatc
gcatttggcgagccgttgcctgatttccccggcttttaccttttcccgcgaccagaacaa
ctgatcaatgccgatccgcagcagctcaaggcgctgggcatgccgctcaggcgggcggaa
tcgcttatctatctggcaagcgctgccttatccggggaactgccgatcaccgcgcccgac
gatatcgaacagggaatgaaaacactgcaaagtttccccgggattggtcgctggacggcg
aactatttcgccctgcgcggctggcaggccagcgatgtgtttctgccggatgattatctg
attaagcagcgtttccccggtatgacgcccacgcagatccgccgctatgccgagcgctgg
cacccctggcgctcttatgcgctgctacatatctggtatacggaaggctgggccccgtaa
DBGET
integrated database retrieval system
