Pseudocitrobacter corydidari: G163CM_08550
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Entry
G163CM_08550 CDS
T07750
Symbol
pdeD
Name
(GenBank) putative cyclic di-GMP phosphodiesterase PdeD
KO
K21090
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
psgc
Pseudocitrobacter corydidari
Brite
Enzymes [BR:
psgc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
G163CM_08550 (pdeD)
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
DUF4083
stn_TNFRSF12A
Motif
Other DBs
NCBI-ProteinID:
UGS40162
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Position
complement(931546..933120)
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AA seq
524 aa
AA seq
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MQSAHWIVKQYLHKRILLCVLVALGVFSLTLGIGFILQRSENKQQIESYTLRAVTTMDKI
LRSLEKERIRLQPLIGKPCNDSLLQLRQQVATLKTARSIFLVKDGILYCSSAFGERDIPL
RKLQPRLADSKPKIILTIDRSLVKGSPVLMQWFPAAQDDQNGVVIGINIDLVSEMILDPS
PPLITRTSLNIDNAYYMDGVGITEQRLQRKGEMFYSQASRAYPFSIAVSGPSFWMLALRE
LPGRLPLALIFGLLFAWITWIATARRMSFSWEINMGIAQREFTLFCQPLLNTRAQRCDGV
EILLRWNNPRLGPIAPDVFIPIAEAKNLILPLTRYVLNETAQQLHYFPADPKFHIGINAA
AAHFRDDKLLLEDLNNLWFSVKPVVQLTIELTERDALHDVNSELLRELHSRKVQLAIDDF
GTGNSSLSWLEKLHPDVLKIDKSFTHAIGTDAVNSTVTDIIIALGQRLNIELVAEGVETP
EQANYLQRHGVHLLQGYLYAPPMPLAEFPQWLAKHNGPPPPVMP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgcgcactggatagtaaaacaatatctccataagcgtattcttctctgtgtc
ctggtggcgctgggtgtcttttcgcttacgctgggtattggatttattttacagcgtagc
gaaaataaacagcagatagaaagctataccctgcgcgcagtaactacgatggataagatc
cttcggagcctggaaaaagagcgcattcgcctgcaaccccttatcggaaaaccctgtaat
gacagtctgttacagcttcgtcagcaggtcgcaaccttaaaaaccgcgcgctctattttc
ctggtcaaggacggtattctttactgctccagcgccttcggcgagcgcgatattccgttg
cgcaaactgcagcccaggttagcggacagcaagcctaaaatcatcctgacaatagatcgt
tcgctggtcaaaggaagtcccgtgttgatgcagtggttcccggcagcgcaggacgaccaa
aacggtgtggtgatcggcattaacattgatttggtcagcgaaatgattctcgacccttcc
ccgccgctcataacccgtaccagtctgaacatcgataacgcctattacatggacggtgtc
ggcattaccgaacagcgattacagcgtaaaggtgagatgttctattcgcaggcatcgcgc
gcctatcctttcagcattgccgtcagtggcccctctttctggatgctggcattgcgtgag
ttacccggcaggctgccgctggcgttgatcttcggcctgcttttcgcctggataacgtgg
attgcgaccgccagacgcatgagcttttcctgggaaatcaacatgggcattgcccagcgc
gaattcacacttttctgccagccgctgctgaacacccgcgcccagcgctgcgacggtgta
gagattctgctgcgctggaacaatcctcgtttagggccgatcgcaccagatgtgtttatc
cccattgccgaagccaaaaatcttatcctgccgctgacccgctatgtgctgaatgaaacg
gcacagcagctgcactactttcccgcggatcctaagtttcatattggcatcaacgcggcc
gcagcgcatttccgtgacgacaagctgctgcttgaagacctcaataacctgtggtttagc
gtaaagcccgtcgtccagttaaccattgaactgaccgagcgcgatgcgctgcacgacgtg
aacagtgagcttttacgcgaactgcacagcagaaaagtccagctggcgattgatgatttc
gggaccggcaacagctcgctctcgtggcttgagaaactgcatcccgatgtgctgaaaatt
gataagtcgtttacccatgcgattggcaccgatgcggtcaattcgacggtaacggacatt
attattgcgctggggcaacgattgaatattgaactggttgcggaaggggtggaaacgccg
gagcaggcaaactatttgcaacgccacggcgtccatttactgcaaggttatctctacgcg
ccgccaatgccactggcggaattcccccagtggctggcgaagcataacgggccacctccg
cccgttatgccctag
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