Pseudocitrobacter corydidari: G163CM_08640
Help
Entry
G163CM_08640 CDS
T07750
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc00061
Fatty acid biosynthesis
psgc00071
Fatty acid degradation
psgc01100
Metabolic pathways
psgc01212
Fatty acid metabolism
psgc02024
Quorum sensing
psgc04146
Peroxisome
Module
psgc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G163CM_08640 (fadD)
00071 Fatty acid degradation
G163CM_08640 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G163CM_08640 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
G163CM_08640 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psgc01004
]
G163CM_08640 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psgc04147
]
G163CM_08640 (fadD)
Enzymes [BR:
psgc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G163CM_08640 (fadD)
Lipid biosynthesis proteins [BR:
psgc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G163CM_08640 (fadD)
Exosome [BR:
psgc04147
]
Exosomal proteins
Exosomal proteins of breast milk
G163CM_08640 (fadD)
Exosomal proteins of breast cancer cells
G163CM_08640 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UGS40171
LinkDB
All DBs
Position
940888..942639
Genome browser
AA seq
583 aa
AA seq
DB search
MLTDGLLIGVVMTTNTHFRGDTLKKVWLNRYPSDVPADINPDRYQSLVELFEHATTRYAD
QPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLQKGDRVALMMPNLLQYPVALFGILRAG
MIAVNVNPLYTPRELEHQLNDSGAAAIVIVSNFAHTLEKVVEKTQVKHVILTRMGDQLST
AKGTLVNFVVKYIKRLVPKYHLPDAISFRRALHNGYRLQYVKPEISADDLAFLQYTGGTT
GVAKGAMLTHRNMLANLEQVNATYGPLLHRGTELVITALPLYHIFALTMNCLLFIELGGK
NVLITNPRDIPGLVKELAKYPFTAMTGVNTLFNALLNNKEFQQLDFSTLHLSAGGGMPVQ
NAVAERWVKLTGQYLLEGYGLTECSPLVSVNPHDIDYHSGSIGLPVPSTDVKLVDDDDNE
VAHGEPGELCVKGPQVMLGYWQRPDATDEIIKDGWLHTGDIAVMDDEGFLRIVDRKKDMI
LVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPAGSSGETVKIFVVKKDASLTDEALITFCR
RQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAKVENKG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttaacggatggtttattaattggggttgtgatgacgacgaatacgcattttagaggt
gatactttgaagaaggtttggctcaaccgttatccgtccgatgttccggcggatatcaat
cctgaccgttatcaatccctggttgaactcttcgaacatgccacgacgcgctatgctgac
cagccagcgttcgtcaacatgggcgaagtgatgacgtttcgtaaactggaagagcgcagt
cgtgcgttcgccgcctatcttcagcaggggcttgggttacaaaagggcgatcgcgtggcg
ttgatgatgccgaacctgctgcaatatccggtcgcgctgtttggtattctacgtgcgggc
atgattgcggtgaacgtcaacccgctctataccccacgcgagctggagcatcagctcaac
gacagcggtgcggcagcaattgtcattgtctccaactttgcccacaccctggaaaaagtc
gtcgaaaaaacccaggtgaagcacgttattctgacgcgcatgggcgatcagctttccacc
gcgaaagggacgctggttaactttgtggtgaagtacatcaagcgtctggtgccaaaatat
catctgccggatgctatctctttccgtcgcgcgctgcacaacggctatcggcttcagtat
gttaaacctgagatcagcgccgacgatctcgcgttcctgcaatataccggcggcactacc
ggcgtggcgaaaggcgcgatgctcacgcaccgcaatatgctcgccaacctcgaacaggtt
aacgccacctatgggccgttgttgcatcgcggtacggagctggtgataaccgcactgccg
ctgtatcacatctttgcgctcaccatgaactgcctgctgtttatcgagctgggcggtaag
aacgtgttaatcaccaacccgcgcgatattccggggctggtgaaagagctggcaaaatac
ccgtttaccgcgatgaccggggtaaataccttattcaacgcgctgctgaacaacaaagag
tttcagcagctcgacttttcgacactgcatctctcggcgggcggcggcatgccggtacag
aatgcggttgctgaacgctgggtaaaactgaccgggcagtatctgctggaaggttacggc
ctgacggagtgctcgccgctggtgagcgtcaacccgcacgatatcgactatcacagcggc
agtattggcctgccggtgccgtccaccgatgttaagctggtggatgatgacgataacgaa
gtggcgcacggcgagccgggtgaactttgcgtgaaagggccacaggtgatgctgggctac
tggcagcgtccggacgcgacggatgaaatcatcaaagacggctggctgcatactggcgat
atcgcggtgatggacgacgaaggcttcctgcgtattgtcgatcgcaaaaaagacatgatt
ctggtctctggcttcaatgtgtatccaaatgaaattgaagatgtagtgatgcagcatcct
ggcgttcaggaagtggcggccgtcggcgtaccggcgggaagtagcggcgaaacggtgaag
atttttgtcgttaagaaagacgcctcgttaactgatgaagcgctcatcaccttctgccgc
cgccagctaacgggctataaggtgccgaaacttgtcgaattccgtgatgaattaccgaag
tctaacgttggtaagattttgagacgagaattacgtgacgaagcacgtgctaaagtagag
aataaaggctga
DBGET
integrated database retrieval system
