Pseudocitrobacter corydidari: G163CM_08650
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Entry
G163CM_08650 CDS
T07750
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psgc
Pseudocitrobacter corydidari
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psgc03016
]
G163CM_08650 (rnd)
Enzymes [BR:
psgc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G163CM_08650 (rnd)
Transfer RNA biogenesis [BR:
psgc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G163CM_08650 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
UGS40172
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All DBs
Position
942721..943836
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AA seq
371 aa
AA seq
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MITTNEALSTLCEAVAQVTSIALDTEFVRTRTYYPQLGLIQLFDGQQTSLIDPLGITDWS
PLQAILQDTRITKFLHAGSEDLEVFLNVFGSMPKPLIDTQILAAFCGRPMSWGFAAMVEE
YTGVKLDKSESRTDWLARPLTERQCIYAAADVWYLLPIAHKLMAETEQAGRLDAALDECR
LMQQRRQEVVDPAEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL
WSVARYMPGSMGELDSLGLSGSEIRFHGKTLLSLVAKAQALPDDALPEPLLNLMDMPGYR
KAFKEIKALVQEVGQESGVSAELLASRRQINQLLNWHWQLKTFASAPEMISGWRGELLGG
RLDALLAEYPR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaccaacgaagcgctgagcaccttgtgcgaagccgttgcgcaggttacttcc
atcgcgctggacaccgagtttgtccgcacccgtacctattatccgcagctgggactcatt
cagctgtttgatggtcagcaaacgtcgcttatcgatccgctcggcattaccgactggtct
ccgttgcaggcgattttgcaggacacccgcatcactaagttcctgcacgcgggtagcgaa
gacctggaagtgtttctgaatgtattcggttcaatgccaaaaccgctgattgatacccaa
attctggccgcgttttgcggccgcccgatgtcctggggttttgcggcgatggtggaagag
tataccggcgtcaaactggacaaaagcgagtcgcgtaccgactggctggcgcgcccgttg
accgagcgtcaatgcatctatgcggcggcagacgtctggtatctgctgcctatcgcgcac
aagctgatggcggaaaccgagcaggcagggcgcttagacgccgcactggatgagtgccgt
ctcatgcagcagcgtcgtcaggaagtggttgacccggcggaagcctggcgcgacatcacc
aacgcctggcaactgcgtacgcgtcagctggcgtgcctgcaactgctggccgactggcgt
ctgcgtaaagcccgtgagcgcgatctggcggtgaattttgtggtgcgtgaagaacatctg
tggagcgtggcgcgctatatgccgggcagcatgggcgagctcgacagtctgggcctttcc
ggtagtgagatccgcttccatggtaaaacgctgctgagcctggtggcgaaagcgcaggcg
ctaccggatgacgcactgccagagccgttgctgaatctgatggacatgccgggctatcgc
aaagcgtttaaagagattaaagcgctggtgcaggaagtggggcaggaatctggtgtaagt
gccgaactgctggcgtcgcgtcgccagattaaccagttgctgaactggcactggcagctg
aaaaccttcgccagcgcaccagagatgatctccggctggcgcggcgagctgctgggtggc
cgtcttgacgcgctgctcgccgagtatccgcgctaa
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