Pseudocitrobacter corydidari: G163CM_13270
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Entry
G163CM_13270 CDS
T07750
Symbol
ydcS
Name
(GenBank) Bifunctional polyhydroxybutyrate synthase / ABC transporter periplasmic binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G163CM_13270 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psgc02000
]
G163CM_13270 (ydcS)
Transporters [BR:
psgc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G163CM_13270 (ydcS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Ral
Glyco_hydro_62
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
UGS40629
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Position
complement(1441341..1442486)
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AA seq
381 aa
AA seq
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MSKKFACSSLCALGMTIAVAHAAEPPKSLDKGEGRLDIIAWPGYIERGETDKQYDWVSQF
EKESGCKINVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIMGKRVQPINPELIANWKT
LDPRLEKGAWFNVGGKVYGTPYQWGPNLLMYNTKIFPTPPDSWNVVFVKQNLSDGKSNQG
RVQAYDGPIYIADAALFVKATQPALGIDDPYQLTEEQYQAVLKVLRDQHGLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANGLKGEGQPIATVFPKEGVTGWADTTMLHAEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVAEGCKASPLLGEKGCETNGYNFFDKIAFWKTPVAE
GGKYVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaatttgcctgcagcagcctgtgcgcgctcgggatgactatcgctgtggcg
cacgccgccgaaccgcctaaatcactcgataaaggagaagggcgtttggatattatcgcc
tggccgggttacatcgaacggggcgaaaccgataaacagtacgattgggtgagccagttt
gaaaaagagagcggctgcaaaattaacgttaaaaccgccgcgacgtcagatgaaatggtg
agcctgatggcgaagggcggctatgaccttgtcaccgcgtccggcgacgcctcgctgcgc
ctgattatgggcaaacgcgtgcagccgatcaatcctgaactgatcgctaactggaaaacc
ctcgacccgcgtctggaaaagggcgcctggtttaacgtcggcggcaaagtgtacggtacg
ccgtatcagtgggggccaaacctgctgatgtataacaccaaaatattcccaacgccgccg
gactcctggaacgttgtttttgtgaaacaaaacctttcggatggcaaatccaaccagggt
cgcgttcaggcctacgatggcccgatttatatcgccgatgcggcgttgttcgtgaaagcc
acgcaaccggcgctgggcattgatgacccttatcaactgaccgaagaacagtatcaggcg
gtgctgaaagtgctgcgcgatcagcatgggttaatccaccgctactggcacgatacgact
gtccagatgagcgactttaaaaacgaaggcgtggtggcgtccagcgcgtggccgtatcag
gctaacggcctgaagggtgaaggtcagccgattgccacggtcttcccgaaagaaggcgtc
accggctgggcggataccaccatgctgcatgctgaggcgaaacatcctgtttgtgcgtac
aagtggatgaactggtcactgacgccaaaagtgcagggtgatgtcgcggcctggttcggc
tcgctgcctgtggtggcggaaggctgtaaagccagcccgctgctgggcgaaaaaggctgt
gaaaccaacggctataacttcttcgacaaaatcgcattctggaaaacgccggtggcggaa
ggcgggaaatatgtgccttacagccgctggacgcaggattacatcgccattatgggtggc
cgctga
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