Pseudocitrobacter corydidari: G163CM_14530
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Entry
G163CM_14530 CDS
T07750
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
psgc
Pseudocitrobacter corydidari
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psgc03016
]
G163CM_14530 (rnb)
Enzymes [BR:
psgc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
G163CM_14530 (rnb)
Transfer RNA biogenesis [BR:
psgc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G163CM_14530 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
UGS40754
LinkDB
All DBs
Position
1583969..1585903
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKEKESAEPEELVESFLSRFVGRVHRKDDRLSIVPDHPLIKDSIPCRAERGVDH
DFKEGDWAVAEMRRHPLKGDRTFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMQDEGLERRDLTALNFVTIDSASTEDMDDALYVEDAADGKLNLTVAIADPTAWIVAGSK
LDNIAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANVVRPVLACRMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSNWLEKTGEWKPDSENIARQITLLERLCQLRSEWRKTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLNGFCKLRRELDAQPSGFLDSRIRRFQSFAEISID
PGPHFGLGLEAYATWTSPIRKYGDMLNHRLLKAIIKGENAERPQDDVTVQMAERRRLNRM
AERDVADWLYARYLHPQAGKETRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGEVAYKVTDVIDVTIAEVRMETRSVIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggataacccgctgctcgcgcagctaaaacagcaacttcactcccagacgccg
cgtgcggaaggggttgtcaaaggcacggaaaaaggtttcggtttcctcgaggtcgatgcg
cagaaaagctactttattccgccgccgcagatgaaaaaagtgatgcacggcgatcgcatt
atcgctgtgatccattctgaaaaagagaaagagagcgccgaaccggaagaactggttgag
tcgttcctgagccgctttgtcgggcgtgtgcaccgcaaagacgaccgcctctctatcgtt
cccgatcatccgttgatcaaagattctattccatgtcgcgctgagcgtggcgtggatcac
gattttaaagaaggcgactgggccgttgcagaaatgcgccgccacccgctgaaaggcgat
cgcaccttctacgcagagctgacccagttcatcaccttcggcgacgatcatttcgtgccg
tggtgggttaccctcgcccgtcataatctggaaaaagaagcgcctgacggcgtagcgaca
gagatgcaggacgaagggctggaacgtcgcgaccttaccgccctcaactttgtcaccatc
gatagcgccagcaccgaagatatggatgatgcgctgtatgtggaagacgccgccgacggc
aagctgaatttaaccgtggcgattgccgacccaaccgcatggattgtcgcaggcagcaag
cttgataacatcgccaaagtgcgcgcgtttaccaactatctgccgggctttaacatcccg
atgctgccgcgtgaactgtccgacgacctctgctcgctgcgtgccaacgtggttcgcccg
gtgctggcctgccgcatgacgctggccgccgatggtaccatcgaagacaatatcgaattc
ttcgcggcaaccattgaatcgaaagccaagctggcctacgacgatgtttccaactggctg
gaaaaaaccggcgaatggaaacccgacagcgagaatatcgcacgtcaaatcacgctgctg
gaacgtttgtgtcagctgcgcagcgaatggcgtaaaacccacgcgctggtgtttaaagac
cgcccggactaccgctttgtgctgggtgaaaaaggcgaagtgctggatatcgtcgctgaa
ccccgccgcattgcgaaccgtatcgtcgaagagtcaatgattgcggctaacatctgcgcg
gctcgcgtgctgcgtgacaagcttgggttcggaatttataacgtccataccggttttgat
ccggcgaatacggaagcgctggcggcgttgctgaaaacgcacgacgtccatgtcgatccg
gaagaagttctgaccctgaatggcttctgtaagctgcgtcgcgagctggatgcccagccg
tcaggtttcctggatagccgcatccgtcgcttccagtcgttcgctgaaatcagtatcgat
ccaggcccgcacttcggtctggggcttgaagcctacgcaacctggacttccccgattcgt
aagtatggcgatatgctcaatcatcgcctgctgaaagcgatcattaagggtgaaaacgct
gagcgtccgcaggatgatgtgacggtccaaatggcagaacgtcgtcgcctgaaccgcatg
gcggaacgtgatgttgctgattggctgtacgcgcgctatctgcacccgcaggcgggcaaa
gagacgcgcttcgcggcagaaattatcgatatcagccgtggcggcatgcgcgtgcgtctg
gtcgacaatggcgccgtagcctttattccagctccgttcctgcacgccgtgcgtgacgaa
atggtttgcagccaggaaaacggcaccgtacagatcaaaggcgaagtcgcttacaaagtg
actgacgttatcgatgtgaccatcgccgaagtgcgtatggaaacccgcagcgtcatcgcc
cgtccggcggtttaa
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