Pseudocitrobacter corydidari: G163CM_30450
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Entry
G163CM_30450 CDS
T07750
Symbol
treR
Name
(GenBank) HTH-type transcriptional regulator TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
psgc
Pseudocitrobacter corydidari
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psgc03000
]
G163CM_30450 (treR)
Transcription factors [BR:
psgc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
G163CM_30450 (treR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_23
HTH_IclR
HTH_31
HTH_7
MarR_2
AAA_18
HTH_Tnp_ISL3
HET-s_218-289
HTH_26
HTH_Crp_2
HTH_28
CENP-B_N
MarR
TrmB
HHH
HTH_AraC
HEAT_ECM29
Motif
Other DBs
NCBI-ProteinID:
UGS42316
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Position
3272550..3273497
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSDRTRERVEEVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPVFYEQGYDPIMMESQFSPEKVEEHLGMLKRRNID
GVVLFGFTGVSETMLANWQSSLVMVARDAKGFASVCYDDKGAINILMQRLYDQGHRHISY
LGVPHSDVTTGKRRHDAYLAFCKKHKLNPVAALPGLAMKQGFEYASKVMTPDTTALLCAT
DTLALGASKYFQQERMDNVQLASVGNTPLMKFLHPEIITVDPGYADAGRQAAEQLIGQVT
GRAEPRQIIIPANLI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccggctgaccattaaagatattgcacgcctgagcggagtgggaaaatcgacc
gtttcccgcgtgctgaataatgaaagcggcgtcagcgatcgtactcgtgaacgtgttgaa
gaagtgatgaaccagcacggtttctccccttcccgctccgcgcgtgcgatgcgcgggcag
agcgataaagtggtcgccattatcgtcacgcgtctcgattccctttcagaaaatcttgcc
gtacaaaccatgctaccggtgttttacgaacagggttacgaccccatcatgatggaaagc
cagttctcgccggagaaagtggaagaacatctcggcatgctgaagcgacgtaacatcgac
ggcgtggtgctgtttggttttaccggcgtcagcgaaaccatgctggctaactggcagtca
tcgctggtgatggtggcgcgcgatgccaaaggtttcgcctcggtttgttatgacgataaa
ggcgccatcaacatcctgatgcagcgcctctacgaccaggggcatcgccacattagctac
cttggcgtcccccacagcgacgtcaccaccggcaagcgtcgccacgatgcgtatctcgcc
ttctgcaaaaaacataaacttaacccggttgccgcgctgcccggcctcgccatgaagcag
ggctttgaatatgccagcaaagtgatgacgccggacactaccgctctgctgtgcgccacc
gatacgctggcgctgggcgcgagtaaatatttccagcaggaacgcatggataacgtgcaa
ctcgccagcgtcggcaacacgccgctgatgaagttcctgcacccggaaattatcaccgtc
gatcccggctatgccgacgccggacgccaggcggcagaacagctgataggccaggtaacc
ggacgcgccgaaccgcgtcagattattattcccgccaacctcatctaa
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